EGAF00005800828 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005800828
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20625794
Sequences flagged as poor quality	0
Sequence length	65
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCGAGAATCTCGTATGCCGTCTTCTGCTTG	22514	0.10915458575800766	TruSeq Adapter, Index 1 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	2915	46.343758	48
GATCGGA	2910	45.58252	1
TCTCGTA	3015	44.219666	43
CGTATGC	3050	43.90564	46
CTCGTAT	3100	43.197487	44
CAACCGA	3130	43.165634	33
ACAACCG	3185	42.14237	32
TGCCGTC	3275	40.88922	50
ATCGGAA	3295	40.748035	2
TCGTATG	3335	40.418915	45
ATGCCGT	3325	40.096928	49
GCCGTCT	3465	38.732227	51
ATCTCGT	3530	37.851913	42
CGTCTGA	3645	36.819614	16
AACCGAG	3670	36.412384	34
ACACGTC	3685	36.339813	13
TCGGAAG	3730	36.233253	3
CGAGAAT	3720	35.998955	37
ACCGAGA	3825	35.168217	35
CCGAGAA	3815	35.027832	36