FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005801132

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005801132
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50268580
Sequences flagged as poor quality0
Sequence length80
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGCGTA5357.5603457E-47.60766973
TCGTATG30300.07.448915572
CTCGTAT31350.06.25525571
CGTATGC40650.06.098555673
TATGCCG26900.05.639548373
Produced by FastQC (version 0.11.5)