FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27088
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1117641.258121677495566No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA7672.8315121086828117No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC3981.4692852923803899No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT3871.4286769049025398No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA2951.0890431187241583No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC2390.882309509746013No Hit
CATAGAACAATGTAATAAGCATCGGAGGAACACTGACGACATGTGCTCAT2370.8749261665682221No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2360.8712344949793267No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT2350.8675428233904312No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC2240.8269344359125812No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG2130.7863260484347313No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT2070.7641760189013586No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG1780.6571175428233904No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA1590.5869757826343769No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT1490.5500590667454224No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC1450.5352923803898405No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGAGGAATTCTTGCCA1280.47253396337861786No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGATCTGAGCAAGGAT1190.4393089190785588No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT1180.43561724748966335No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG1170.4319255759007679No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC1150.424542232722977No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGATCTGAGCAAGGATAGCCCT1140.42085056113408154No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTTTCTCCCTTGTGCTCATA1100.40608387477849966No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA1100.40608387477849966No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1040.38393384524512697No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT1010.3728588304784406No Hit
CATAGAACAAGGCCAGAATTACCCTGCATGGTTCTACACATAGACTCTTC980.3617838157117543No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG970.35809214412285884No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA960.3544004725339634No Hit
CATAGAATGCAGGAGAATATACACAGGTTGGACTTCAGTTGACTATAAGA950.3507088009450679No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT900.3322504430005907No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACTCTTCACTA840.31010041346721795No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC800.29533372711163614No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTAACTTCAGTTGAC790.2916420555227407No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC790.2916420555227407No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT780.28795038393384526No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGAATTCTTGCCAGGGATCT740.27318369757826344No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTCAGTGTAGCTTGGGTG740.27318369757826344No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTTC700.2584170112226816No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAGAGGCCTGA690.2547253396337862No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT680.25103366804489075No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT650.23995865327820437No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG640.23626698168930893No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG610.22519196692262256No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACTCTTCACTATGT590.21780862374483168No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG590.21780862374483168No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC590.21780862374483168No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC570.21042528056704077No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG560.2067336089781453No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA560.2067336089781453No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGGCAACA560.2067336089781453No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG540.1993502658003544No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAAGCCAGAATTAGCGGAGAGTGAG540.1993502658003544No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACTCTTCACTAT540.1993502658003544No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTGTGCTCATACAGAATTAG530.19565859421145892No Hit
CATAGACAGCTCACAGACTGCATACTATGAGGCCTGAGATTGCTGCTATC530.19565859421145892No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTTTCTATGAGACCAGGCAGTCT530.19565859421145892No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCAGAGGCCTGAGATTGCTG510.18827525103366805No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGATCTATAGAATTAGCGGAGAGTG510.18827525103366805No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG510.18827525103366805No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGCTTGGGTGACAGAGTG500.1845835794447726No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA490.18089190785587714No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTACCCCCAGTATT490.18089190785587714No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG470.17350856467808623No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGACATGTGCTCATACAGA460.1698168930891908No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTAGAATTAGCGGAGAGT440.16243354991139988No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG440.16243354991139988No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACTCTTCACTATGTCAT440.16243354991139988No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG430.15874187832250441No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG430.15874187832250441No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTGACGACATGGTTCTACACAT430.15874187832250441No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGTTACAAC420.15505020673360898No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT420.15505020673360898No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC410.15135853514471354No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACCGTAGAGGCCTGAGATTGCTGC410.15135853514471354No Hit
CATAGAACAAGGCCAGAATTACCCTGACACTGACGACTCTTCACTATGTC400.14766686355581807No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGAGACAGCCGCTCACCTCTA390.14397519196692263No Hit
CATAGAGCTATCAGTATACTCCCACCATGACTCTTCACTATGTCATCTTA390.14397519196692263No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC380.1402835203780272No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG370.13659184878913172No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG370.13659184878913172No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG370.13659184878913172No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT370.13659184878913172No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT360.13290017720023625No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGAGGAATTCTTGC360.13290017720023625No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCACTGACGACTCTTCACTAT360.13290017720023625No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGCAACAGAACAACAACAT350.1292085056113408No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGAGGAATTCTTGCCAGGG350.1292085056113408No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGATCTGAGCAAGGATA350.1292085056113408No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTGACTCTTCACTATGTCAT350.1292085056113408No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTTAGAGGGTGGTCTTACTC340.12551683402244537No Hit
CATAGACTTGATGCCCAGGAAACCTCATATACACTGACGACATGGGCAAC340.12551683402244537No Hit
CATAGATCATGGGACTTCAGCATGGCGATGTTTGCAGATTTGGACCTGCG340.12551683402244537No Hit
CATAGATTCTCCCTTGTGCTTTTGGTTCGGCAGTGAGGTACAGAAATCTA330.12182516243354992No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACTCTTCACTATGTC320.11813349084465447No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT320.11813349084465447No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG310.114441819255759No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC300.11075014766686357No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGGGAGAGGCTGTTTGAGATCTAT300.11075014766686357No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTGGGTGAGAAATGATGATGGC290.1070584760779681No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACACTGACGACATGGTGGGTG290.1070584760779681No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCGCTACCGTAAGGCAGTCTCAA290.1070584760779681No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTTGACCTGCG290.1070584760779681No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGGCAACAGAAC280.10336680448907265No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACATGGTGGG280.10336680448907265No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)