FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804099

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804099
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27088
Sequences flagged as poor quality0
Sequence length150
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1050138.76624335499114No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT7622.8130537507383346No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG6672.462344949793266No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG5231.9307442409923214No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3081.137034849379799No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG2821.0410513880685173No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATGTGTAGAACCATGTCGTC2650.9782929710572947No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA2480.915534554046072No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATGTCGTCAGTGTTCCTCC2320.8564678086237448No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG2120.7826343768458357No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT2030.7494093325457767No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG1880.6940342587123449No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT1880.6940342587123449No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT1490.5500590667454224No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT1470.5426757235676314No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC1360.5020673360897815No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT1150.424542232722977No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTAGAAGCTTTGAGATTTGTGT1120.4134672179562906No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG1090.4023922031896042No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT1090.4023922031896042No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTAGAAGCTTTGAGATTTGTG1080.3987005316007088No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT1070.39500886001181335No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGGAAAGTTGGAACCTATCAGTGT1070.39500886001181335No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG1060.39131718842291785No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAAACTATGGCTT1060.39131718842291785No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG1030.38024217365623153No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA930.343325457767277No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCTATGTGTAGAACCATGCAG900.3322504430005907No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCAACCTGTGTATATTCTC860.31748375664500883No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT840.31010041346721795No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTAGAAGCTTTGA820.30271707028942707No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA780.28795038393384526No Hit
CATAGATCCCTGGCAAGAATTCCTCATGGTGGGAGTATACTGATAGCTCT720.2658003544004725No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA710.26210868281157707No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA680.25103366804489075No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTACGGTAGCAGAGGCAAGG680.25103366804489075No Hit
CATAGATAGCAGCAATCTCAGGCCTCTGGTCTCATAGAGAAGCTTTGAGA660.24365032486709984No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT660.24365032486709984No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC650.23995865327820437No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTGACACTATGGCTTAATGTT640.23626698168930893No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA620.228883638511518No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTAGAAGCTTTGAGAT610.22519196692262256No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC580.2141169521559362No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAACCTGTGTATA580.2141169521559362No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA540.1993502658003544No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA540.1993502658003544No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGGCTTGGAGGCTGAAACTCTAA540.1993502658003544No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC540.1993502658003544No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG540.1993502658003544No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA530.19565859421145892No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTAGAGGCAAGGG530.19565859421145892No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT500.1845835794447726No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA490.18089190785587714No Hit
CATAGATAGCAGCAATCTCAGGCCTCATAGTATGCAGTCTGTGAGCTGTC490.18089190785587714No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACACACTGAAACATTTTCTGG480.1772002362669817No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG470.17350856467808623No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTAGGTAAACAAACTT460.1698168930891908No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC460.1698168930891908No Hit
CATAGACACAACGTTTGAGACTGCCTGGTCTCATAGAAAGAGGCAAGGGT460.1698168930891908No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGTACGGTAGCAGAAGCT460.1698168930891908No Hit
CATAGATAGCAGCAATCTCAGGCCTCTGCAGAAGCTTTGAGATTTGTGTC460.1698168930891908No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTGAAACATTTTCTGGTCAGC460.1698168930891908No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATAGATCTGTGACACCGAAAAA450.16612522150029535No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTTAGGTCA440.16243354991139988No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA440.16243354991139988No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATGTCACTATGGCTTAATG430.15874187832250441No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTATGGCTTAATGTTTCTC420.15505020673360898No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC410.15135853514471354No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGCAGGAAAGTTGG410.15135853514471354No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA410.15135853514471354No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT400.14766686355581807No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA390.14397519196692263No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG390.14397519196692263No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA390.14397519196692263No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCATGTCGTCAGTGTACCAAAA380.1402835203780272No Hit
CATAGATAGCAGCAATCTCAGGCCTCTACGGTACCAAAAGCACAAGGGAG380.1402835203780272No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA370.13659184878913172No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTCAGGGTAATTC370.13659184878913172No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA370.13659184878913172No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA360.13290017720023625No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGGTGGGAGTATACTGAT350.1292085056113408No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTAACCTGTGTATATTCTCCT340.12551683402244537No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG340.12551683402244537No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGAAGCTTTGAGATTTGTGTCTGTT330.12182516243354992No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT330.12182516243354992No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTACTATGGCTTAATGTTTCTC320.11813349084465447No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTAGGTAAACAAACTTCTGGCC320.11813349084465447No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG310.114441819255759No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGAAAGTTGGAACCTATCAGTGTCTA310.114441819255759No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCACACTGAAACATTTTCTGG310.114441819255759No Hit
CATAGACGGGAAGAGTAAGACCACCCTCTAACTATGGCTTAATGTTTCTC310.114441819255759No Hit
CATAGATTTCTGTACCTCACTGCCGAACCAAAAGCACAAGGGAGAATCTA300.11075014766686357No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA300.11075014766686357No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTATATGAGGTTTC290.1070584760779681No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTAGAGGCAAGGGTAC290.1070584760779681No Hit
CATAGATCTCAAACAGCCTCTCCCAGGTAAACAAACTTCTGGCCCTCTAT280.10336680448907265No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA280.10336680448907265No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA280.10336680448907265No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)