FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804102

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804102
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115930
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2114318.237729664452687No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1202210.370050892780126No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG65085.613732424739067No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG54864.7321659622185805No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG44103.8040196670404556No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA39713.42534287932373No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC29072.507547658069525No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT22851.971016993013025No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG22031.9002846545329077No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA20071.731217113775554No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG18381.5854394893470198No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT18271.5759510049167602No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA15931.3741050634003278No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT15131.3050979039075306No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC12851.1084274993530578No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA10840.9350470111274045No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC10500.9057189683429655No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA10210.8807038730268266No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG8480.7314758906236521No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA8160.7038730268265333No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG7410.6391788148020358No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG7130.6150263089795567No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATGGTTCTACAC6880.5934615716380575No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC6690.5770723712585181No Hit
CATAGACGGATTATTCTCTCCATGGTCTACAAAGGATTCTGGGCCATCTA6070.5235918226516001No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA5740.49512636936082116No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG5170.4459587682222031No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT5040.4347451048046235No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT4900.422668851893384No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC4870.420081083412404No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT4700.40541706202018457No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA4640.4002415250582248No Hit
CATAGAGAAGACTCCCTCAACCCACCACGCTGTCCTTCTCTGAATCTATG4560.39334080910894503No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC4150.3579746398688864No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA3630.3131199861985681No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3470.2993185543000086No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGGTGCATTACAGAGAGGAGAT3470.2993185543000086No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACTGACGCTATACCACACTAC3440.29673078581902873No Hit
CATAGACCGCTTCCCAATTTTTGTAACAAGGGGTAAGGCGTACTGGTCTA3430.29586819632536876No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA3410.2941430173380488No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC3330.28724230138876905No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT3310.28551712240144916No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA3230.27861640645216945No Hit
CATAGATGTGTAGCCTGGGTCTGACAAGGGGTAAGGCGTACTGGTCTATG3150.2717156905028897No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAATAGAGTGTCTGTTTCCCCACTC2950.2544639006296903No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT2730.23548693176917104No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT2670.23031139480721124No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG2580.22254808936427156No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG2400.20702147847839214No Hit
CATAGATCACGTAGAAACTGGAGAGGCGGAGGTTGCAGTGAGCTGAGATG2340.20184594151643231No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT2320.2001207625291124No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG2300.19839558354179243No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2250.19408263607349263No Hit
CATAGAAGCCATGAACACAGGATTGAATGTCGGTGGAAGGGTAAGAGAGG2240.19322004657983266No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGACGACATGGTTCTACACAT2130.18373156214957304No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT2130.18373156214957304No Hit
CATAGATCCACGTGAGAATAAAGCATACACTGACGACATGGTTCTACACA2080.17941861468127318No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA2080.17941861468127318No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT1980.1707927197446735No Hit
CATAGAAATGATGCTGAAGGGCCTGCTCTACACATAGAAATGATGCTGAA1880.16216682480807385No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT1770.15267834037781422No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGATCATTGTTCACT1740.1500905718968343No Hit
CATAGACCAACATTTCTTCTCCCAGGGTTCTACACATAGACCAACATTTC1720.14836539290951437No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG1700.14664021392219442No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGTGGAAGGGTAAGAGAGGGTC1690.14577762442853445No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT1670.1440524454412145No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTGTTTCCCCACTCAAAT1640.14146467696023463No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCTGTTTCCCCACTCAAATACC1620.13973949797291468No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTACTGTCATTGTCGCTGTC1610.13887690847925474No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT1510.13025101354265506No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC1400.1207625291123954No Hit
CATAGAAATGATGCTGAAGGGCCTGCCACATAGAAATGATGCTGAAGTGA1340.11558699215043561No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1320.11386181316311568No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1310.1129992236694557No Hit
CATAGAAATGATGCTGAAGGGCCTGCCATGGTTCTACACATAGAAATGAT1290.11127404468213578No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAGTCCCAACTGTCTCT1270.10954886569481584No Hit
CATAGAAATGATGCTGAAGGGCCTGCCATAGAAATGATGCTGAAGTGATG1250.1078236867074959No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAATGGTGGAAGGGTAAGAGAGGGT1220.10523591822651601No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT1160.1000603812645562No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)