FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences326938
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA284518.702261590882674No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG159304.872483467813469No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC150924.6161657561984235No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG144484.419186512427433No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA102533.136068612397458No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC101833.114657825031046No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG99723.050119594540861No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC98823.022591439355474No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA87502.6763484208014976No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG85852.625880136294955No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC84392.5812233512164386No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA78272.3940318959558082No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA74012.2637319614116436No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT72032.203170020003793No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT70212.1475019728511215No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA65141.9924266986401091No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA52891.6177379197278994No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT47521.4534865937884247No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG39271.201145171255712No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA37561.148841676403477No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT36151.1057142332797043No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG35651.0904208137322673No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT31240.9555328533238718No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT24050.7356134802317259No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA20930.6401825422557181No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC19890.608372229597049No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT19220.5878790474034832No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG17430.5331286054236584No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG16570.5068239238020664No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT15920.48694247839039817No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA15740.48143684735332076No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG14890.4554380341226777No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCAAGGGGTAAGGCGTACT13190.4034404076613915No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG12350.3777474628216971No Hit
CATAGACGTGACTAAAAGCATGTTGGTCCCAACTGTCTCTGAAAAATTTC11960.3658185955746961No Hit
CATAGAGTCCAACTATTCCAGCACCAACGCTATACCACACTACACACTCT11160.3413491242987967No Hit
CATAGATGGCCAAGATACGAGCACATTGCTTCTTGTGGTAACTGGTCTAT11140.34073738751689925No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA11020.33706696682551435No Hit
CATAGATGTGTAGCCTGGGTCTGACATTGCTTCTTGTGGTAACTGGTCTA10770.32942025705179573No Hit
CATAGACCAGCAGACACTCCCATCATTCAGCCTTCCCCACACCCTCTTCT10510.32146767888712846No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA10110.30923294324917877No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTCTGGTGCATTACAGAGAGGA9690.29638647082933156No Hit
CATAGACCAGCAGACACTCCCATCATTGCTTCTTGTGGTAACTGGTCTAT9620.29424539209269035No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTCTGAGGAGAATTCAAGC9480.289963234619408No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG9230.28231652484568937No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTGGTGGAAGGGTAAGAGAGGGT8910.27252873633532965No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA8090.24744752827753272No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGCTATACCACACTACA8080.247141659886584No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT8000.24469471275899404No Hit
CATAGACCAGCAGACACTCCCATCATGGTACCACGCTGTCCTTCTCTGAA7960.24347123919519909No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGCCCTCTCTGCTGTTCCTT7810.23888321333096796No Hit
CATAGATGGCCAAGATACGAGCACATGATAGGCTTAGAGGGCTTGCTCTA7800.23857734494001923No Hit
CATAGAGCTTGGGCGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA7570.23154237194819816No Hit
CATAGACACAACAGAGAGAACGGGCTACGCTATACCACACTACACACTCT6940.21227266331842734No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCATGGCTCAGGTATGTCTTTATTA6890.21074332136368362No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTACAAGGGGTAAGGCGTAC6700.2049318219356575No Hit
CATAGATGAGGACACCATAAAGACAACACACTGACGCTATACCACACTAC6680.20432008515376002No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACAGGCTAATCTGAAATCTT6640.20309661158996506No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGTCTGCCTCTAAGTAAAC6590.20156726963522137No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA6460.1975909805528877No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTCCGCTATGTAGTTCAGG6230.19055600756106664No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG6180.18902666560632292No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGTTCTTCCTTTTCTGCCTTCAT6120.18719145526063047No Hit
CATAGAGAAGACTCCCTCAACCCACCGTACAAGGGGTAAGGCGTACTGGT5980.18290929778734805No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG5970.1826034293963993No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGCTATACCACACTAC5950.18199169261450182No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTATAGAGATCCCACCATTTGC5740.17556845640457822No Hit
CATAGATCCACGTGAGAATAAAGCATACAAGGGGTAAGGCGTACTGGTCT5340.16333372076662853No Hit
CATAGAAAAAACAGTTGGCCAGGCATACACTGCCCTCTCTGCTGTTCCTT5320.16272198398473103No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT5120.1566046161657562No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT4720.1443698805278065No Hit
CATAGACCAGCAGACACTCCCATCATACACTGGCTCAGGTATGTCTTTAT4580.1400877230545241No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC4570.13978185466357534No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACTGTGTGCTTGAACCAGAT4560.1394759862726266No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGCTATACCA4530.1385583810997804No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG4400.13458209201744675No Hit
CATAGAAGGACAAAGACATTTAGGACCCTACGGTGGAAGGGTAAGAGAGG4360.13335861845365177No Hit
CATAGAGCTTTTTTTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG4340.13274688167175427No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGGAGACAGCCGC4330.13244101328080554No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTGTCTGCCTCTAAGTAAA4330.13244101328080554No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCATCAGGAACCATGGGAGGTCT4300.13152340810795932No Hit
CATAGAGAAGACTTCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG4190.12815885580752315No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGCCCTCTCTGCTGTT4170.12754711902562565No Hit
CATAGACGGATTACTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC4150.12693538224372816No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT4140.12662951385277943No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGCCCTCTCTGCTGTTCCTT4070.12448843511613822No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGCCCTCTCTGCTGTTCC3980.12173561959759954No Hit
CATAGATCACGTAGAAACTGGAGAGGCACACTGACGATCATTGTTCACTG3950.1208180144247533No Hit
CATAGAGAAGACTCCCTCAACCCACCTACGCTATACCACACTACACACTC3940.12051214603380457No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGACATGGTTCTACACAT3930.12020627764285582No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGGGTGGAAGGGTAAGAGAGGGT3920.11990040925190708No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACACACTGGCTCAGGTATG3650.11164196269629104No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC3630.11103022591439356No Hit
CATAGAAATGATGCTGAAGGGCCTGTCATTGTCGCTGTCCCATCTATGAG3470.10613633165921367No Hit
CATAGACGGATTATTCTCTCCATGGTCTGTTTCCCCACTCAAATACCATC3460.10583046326826492No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAATGGTGGAAGGGTAAGAGAGGGT3290.10063070062213632No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGACATGCCAGGAATCAATGT3280.10032483223118757No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)