FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804108

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804108
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74358
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA57317.707307888861992No Hit
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC54287.299819790742086No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA44706.011458081174856No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC35674.797062858065037No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA25663.4508728045401975No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT25663.4508728045401975No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT21572.90083111433874No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG21252.857796067672611No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA15822.1275451195567388No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT13001.7482987708114794No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA12781.7187121762285162No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG11851.5936415718550794No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA11671.569434358105382No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC10981.476640038731542No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA9641.296430780817128No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT9091.2224642943597193No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC8281.1135318324860808No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT7931.0664622501950025No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT7681.0328411199870895No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC6980.9387019554049328No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC6080.8176658866564459No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA6060.8149761962398129No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA5970.8028725893649641No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA5730.7705963043653676No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC5410.7275612576992387No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT5220.7020091987412249No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT5130.6899055918663761No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT4980.6697329137416284No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG4600.6186287958256005No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCGTCAGTGTCCACTTTGTTCCCTGG4570.614594260200651No Hit
CATAGATCATGAATGACTCCCACTCTGCTACCGTAGCCTTCTCTGATACC4450.5984561177008526No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4220.5675246779095726No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA4200.5648349874929396No Hit
CATAGATGCACCAGAAGCCACCTACCAGCACAAGCACATTATTATTGGTT4190.563490142284623No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG4140.5567659162430404No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA4010.5392829285349257No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG3800.5110411791602787No Hit
CATAGACCCACTTACACACACAGGTTTACACTGACGACAATGGGCACACT3770.5070066435353291No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3740.5029721079103796No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT3670.49355819145216384No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCAAGTATATGACACATTACA3600.4841442749939482No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG3360.4518679899943517No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACAAGCACATTATTATTG3270.43976438311950294No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA3160.4249710858280212No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTACAAGCACATTATTATTG3070.41286747895317255No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3050.41017778853653947No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG2980.40076387207832376No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTGGTGGTGCTGGAACTAGTTC2910.3913499556201081No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC2760.3711772774953603No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT2740.36848758707872725No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA2710.36445305145377765No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTACACATAGAACAAGGGCATGGTC2700.36310820624546114No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG2640.355039134995562No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2540.34159068291239675No Hit
CATAGAATTGCCTACTTTGGGACCCACCCGTAATCCCTCCCTTTTCTATG2320.31200408832943327No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT2290.3079695527044837No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG2160.29048656499636893No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2090.2810726485381533No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2070.2783829581215202No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTGCTGACATCCCAACCACA2060.2770381129132037No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2010.27031388687162106No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT1860.25014120874687323No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA1830.24610667312192366No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT1830.24610667312192366No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT1830.24610667312192366No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC1700.2286236854138089No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA1690.22727884020549236No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA1690.22727884020549236No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA1670.2245891497888593No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT1620.2178649237472767No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1620.2178649237472767No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA1610.2165200785389602No Hit
CATAGACCATGTAATACCATCGTGAGCAGAATTTTGGGGGAAGAGAAACA1500.20172678124747842No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT1470.19769224562252882No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG1450.1950025552058958No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA1440.19365770999757928No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCGTGTACAGCCTACATCCCTCATC1440.19365770999757928No Hit
CATAGATGTGTGAGAGAGGGAGAGACACGTCTTTTGTGGGTCCATTTTTG1440.19365770999757928No Hit
CATAGACAGTCCTGCCGTGTACATGTGCCCTGTGATTGTCCTGGTCTATG1430.19231286478926277No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAGCATGAGAAGAATGGC1370.18424379353936363No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA1340.18020925791441406No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT1300.17482987708114797No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCTTCTCTGATACCATCCCTCTATG1290.17348503187283143No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT1260.1694504962478819No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1150.15465719895640012No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGTGTAGGATGACTTATGGAA1120.15062266333145055No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG1060.1425535920815514No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA1060.1425535920815514No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACTTAGGAGTTCTGGCCC1040.13986390166491836No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTCAGGTTTCCTGGTGGCATGTGTG1040.13986390166491836No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC990.13313967562333576No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT940.12641544958175313No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT900.12103606874848705No Hit
CATAGACCTGGTACTTCTCTTCTGGGTACACTGACGACAAGGTTTTCCGG900.12103606874848705No Hit
CATAGATCTGGGAGGTGAAGAGGACATCTATGTGTATGGTGAAAAGTAGG890.11969122354017053No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC830.11162215229027139No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC830.11162215229027139No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGGAACAAGGGCATGGTCAA800.10758761666532182No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCTATCCCCTTTACCTACCTTCTC800.10758761666532182No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGGAACAAGGGCATGGTCAAG780.10489792624868877No Hit
CATAGACAGAACACCACACCCCTGTCCTTAGGAGTTCTGGCCCCTGTCTA770.10355308104037224No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCTTAGGAGTTCTGGCC760.10220823583205574No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)