FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804112

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804112
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76925
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3476845.197270068248294No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG39565.142671433214169No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT34914.538186545336367No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG14221.848553786155346No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC11671.5170620734481637No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA10961.4247643808904777No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT10101.3129671758206045No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG9661.2557686057848554No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTGACTGTGTTAATTTAAAAGA8391.0906727331816704No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT7060.9177770555736107No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT5610.7292817679558011No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA5300.6889827754306143No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG4370.5680857978550535No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4330.5628859278518037No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCGTATGGTATATTTTCTAAAGCCT4090.5316867078323042No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG3350.43548911277218066No Hit
CATAGAAGCATGGAAGACAAACAGCAACACTGGAGACAGCCGCTCACCTC3330.43288917777055574No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT3260.4237894052648684No Hit
CATAGATCCACAAAGACCAAGAGTGTCAGTGTAGTTGCAATATAGATGAA3260.4237894052648684No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT3170.412089697757556No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAAATACAAAAATTA2800.3639909002274943No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACTAAAAATACAAAAATTAG2780.36139096522586933No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2770.36009099772505687No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT2630.34189145271368215No Hit
CATAGACACATGTAGGATGGGGTGGCGGATGGAGGATGATCAATGCTGCT2610.3392915177120572No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAT2480.322391940201495No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGATGAGGGTATAAGGTC2480.322391940201495No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT2050.2664933376665583No Hit
CATAGACACATGTAGGATGGGGTGGCAGGCTGGCCTGGCTGGCTGGATGG2000.25999350016249595No Hit
CATAGAACCAAAAATGGCTAGGCATGTCGTCAGCAGACAGGATGCGCAGA1980.257393565160871No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1920.24959376015599608No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1800.23399415014624636No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT1800.23399415014624636No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1760.22879428014299644No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1740.2261943451413715No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1710.22229444263893403No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT1680.21839454013649662No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1680.21839454013649662No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1540.20019499512512187No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTGTATCAAAAA1480.192395190120247No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1440.18719532011699708No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1440.18719532011699708No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA1380.1793955151121222No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1370.17809554761130972No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1340.17419564510887228No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAG1320.17159571010724733No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG1310.17029574260643485No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG1280.16639584010399738No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1270.16509587260318492No Hit
CATAGACACATGTAGGATGGGGTGGCTGTGCTGGGTAGTGGTAGTCTATG1220.1585960350991225No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1130.1468963275918102No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG1130.1468963275918102No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1110.14429639259018523No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1060.13779655508612285No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1040.1351966200844979No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG1020.13259668508287292No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1020.13259668508287292No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1010.13129671758206046No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG970.1260968475788105No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC960.12479688007799804No Hit
CATAGAGATAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT930.1208969775755606No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG910.11829704257393565No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA890.11569710757231069No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG870.11309717257068574No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT870.11309717257068574No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA860.11179720506987326No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC840.10919727006824831No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT840.10919727006824831No Hit
CATAGAGGGTGCTCCTGTACTGGCTGTGCTGGGTAGTGGTAGTCTATGAG830.10789730256743581No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG810.10529736756581085No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGTAGATTTGGACCTGCG780.10139746506337341No Hit
CATAGAAGAGTGAGACTTGAGATGGGAAGATTATCCTGGATTATCTTGGT780.10139746506337341No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC780.10139746506337341No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG770.10009749756256094No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)