FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804116

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804116
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82275
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG40374.906715284108174No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA40264.89334548769371No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA32063.896687936797326No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA27613.3558189000303855No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT27533.3460954117289576No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC20472.487997569127925No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG20402.479489516864175No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG20282.464904284412033No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA16972.0625949559404435No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA16472.0018231540565177No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT15431.8754178061379518No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA14231.72956548161653No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT12631.5350957155879672No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG11521.4001823154056519No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA11021.339410513521726No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA10891.3236098450319052No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC10601.2883621999392283No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT9221.1206320267395928No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG8851.0756608933454876No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8291.0075964752354907No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG8020.9747797022181707No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC7400.8994226678821027No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG6670.810695837131571No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC6660.8094804010938924No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT5780.7025220297781829No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT5620.6830750531753267No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA5420.6587663324217563No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT5370.6526891522333638No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG5240.636888483743543No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT5190.6308113035551505No Hit
CATAGATGTGCCACATACCTTTCCCAGAGAACAGCTAAAAATCTTGGAGC5140.6247341233667578No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG4980.6052871467639016No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC4960.6028562746885445No Hit
CATAGATGCTTCTGATATGTTGCCGTATCCTTGGAGAGAAATGCTGCTCT4800.5834092980856883No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTAGACCAAAGCTAGAAACTCCC4730.5749012458219387No Hit
CATAGAAGGAGCTGGACTGGATGGACATACATGTGTGAGAGGGAAGGACT4650.5651777575205105No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATAGAACAGCTAAAAATCTT4490.5457307809176543No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT4350.528714676390155No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGCTCACA4290.5214220601640839No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC4020.4886052871467639No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA3880.47158918261926464No Hit
CATAGATGTGGTCTCAGTGCCCTATGACTCCCTCATTATCCCTGTGCCTC3870.4703737465815861No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC3640.4424187177149802No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAACAGCTAAAAATCTTGGAGC3460.4205408690367669No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAAGCTAGAA3380.4108173807353388No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT3360.4083865086599818No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA3270.3974475843208751No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACATAGACATGTGTGAGAGGGAAG3220.39137040413248253No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGCAGCAACAAAAGTCACTC3220.39137040413248253No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG3170.38529322394408994No Hit
CATAGATGTGCCACATACCTTTCCCATACACTCCCTCATTATCCCTGTGC3010.36584624734123367No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG2900.35247645092677No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGCAAACTAACACAGAAACAGAA2850.3463992707383774No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT2850.3463992707383774No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAAGACAGTGAAACAAGATC2770.33667578243694923No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCGCAAACTAACACAG2770.33667578243694923No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT2730.3318140382862352No Hit
CATAGATGATCCATCTACCTCTGCTTCACACTGACGACATGGCTCACACC2670.3245214220601641No Hit
CATAGACTCTGTTTTGCTACCTGGGGTACACATAGAACAGCTAAAAATCT2640.32087511394712853No Hit
CATAGATGCTTCTGATATGTTGCCGTCTTGGTCCAGTGAACTCAAGGGGG2620.3184442418717715No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA2510.30507444545730783No Hit
CATAGATGCTTCTGATATGTTGCCGTTAGATGCTCAGATCTCAAAAGGCT2480.30142813734427226No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGGCTCACACCT2450.2977818292312367No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2440.2965663931935582No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTGGCTGAGAAAGGAGGATCACT2430.29535095715587967No Hit
CATAGATGATCCATCTACCTCTGCTTCAACACGGACTACAAGTACCCACC2420.2941355211182012No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2340.284412032816773No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAAATAGAACAGCTAAAAATCTTG2320.281981160741416No Hit
CATAGATCATGGGACTTCAGCATGGCGTCTCATAGAGGTGGTGGAGGGCT2320.281981160741416No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGAGAAAGGAGGATCACTCTAT2200.2673959282892738No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA2180.26496505621391675No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGCGACATGTGTGAGAGGGAAGGACT2090.2540261318748101No Hit
CATAGAAGTGACCCTCAGCTCAGTGAACACGGACTACAAGTACCCACCAC2050.249164387724096No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT2000.24308720753570343No Hit
CATAGAATACAACACACTCTCTGCCCTGATGGTTCTGCACATCTACAAGG1990.24187177149802488No Hit
CATAGATGCTTCTGATATGTTGCCGTATACACGGACTACAAGTACCCACC1970.23944089942266786No Hit
CATAGAATACAACACACTCTCTGCCCTGAGATTGGCCTCTGCTGAGATTG1970.23944089942266786No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT1950.23701002734731083No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1950.23701002734731083No Hit
CATAGACTCTGTTTTGCTACCTGGGGATGGCGCCTCTAACTTCATAGCAC1910.23214828319659675No Hit
CATAGACAGCTGGGGTGGGAGGTTAGTACGGAGATAGAGAGGTTGGTTCT1890.22971741112123972No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACTGACGACATGGCTCACACCTA1870.2272865390458827No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGCTCACACC1860.22607110300820418No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGTTCTACACA1850.22485566697052567No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGTAGGACACTTTG1840.22364023093284716No Hit
CATAGATGTGCCACATACCTTTCCCAGATCTCCCTCATTATCCCTGTGCC1800.21877848678213307No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC1800.21877848678213307No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1790.21756305074445456No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGCTCACACCT1790.21756305074445456No Hit
CATAGATTTGTGTGAGAAGGAGCAAGATCGTGCCTCTTGTAGAAGGGATG1780.21634761470677605No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGACACTTTGGACTCTGCCTC1780.21634761470677605No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG1770.21513217866909753No Hit
CATAGACCACCGTGCCCAGATAAGTTACACTGACGACATGGCTCACACCT1740.21148587055606197No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTATGGCTCACACCTATAATCCC1680.2041932543299909No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1680.2041932543299909No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGCTCACACCT1660.20176238225463383No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1640.1993315101792768No Hit
CATAGATGTGGTCTCAGTGCCCTATGACACTGACGACATGGCTCACACCT1640.1993315101792768No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA1620.19690063810391978No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACATAGAGAACAGCTAAAAATC1590.1932543299908842No Hit
CATAGACTCTGTTTTGCTACCTGGGGACTGACGACATGGCTCACACCTAT1570.19082345791552718No Hit
CATAGAAGTGACCCTCAGCTCAGTGACCTCTAACTTCATAGCACATCATG1550.18839258584017016No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCACTGACGACATGGCTCAC1510.18353084168945608No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG1480.17988453357642054No Hit
CATAGATGCTTCTGATATGTTGCCGTAGTAGATGCTCAGATCTCAAAAGG1470.17866909753874202No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGTCATTCTTCTCTG1460.1774536615010635No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT1450.176238225463385No Hit
CATAGATCATGGGACTTCAGCATGGCTCTACACATAGAGAACAGCTAAAA1410.17137648131267091No Hit
CATAGATGGAAATTTTTGGCCAGGTGCAAATTGTCAGTGTGTCTATGAGA1370.16651473716195686No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACTGACGACATGGTG1330.16165299301124278No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT1280.1555758128228502No Hit
CATAGACCTGTGTGTGAGGCATTGTTCTCTGGTGGAGGGCTTTGCTGTTT1280.1555758128228502No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGTGAAACAAGATCGTGCCTCT1260.15314494074749316No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1260.15314494074749316No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1230.14949863263445762No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGTGAAACAAGATCGTGCCT1190.14463688848374354No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1190.14463688848374354No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGGGTGGGGAAAGAGAGCACTCT1190.14463688848374354No Hit
CATAGATGCCTCAAAGAGCTGAAGACACCCTCTAACTTCATAGCACATCA1180.14342145244606502No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTGCAGCA1080.13126709206927986No Hit
CATAGATGGAAATTTTTGGCCAGGCGACACTGACGACATGGCTCACACCT1030.12518991188088727No Hit
CATAGACTCTGTTTTGCTACCTAGGGTGGGGAAAGAGAGCACTCTATGAG1020.12397447584320874No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA1020.12397447584320874No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT1020.12397447584320874No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGCAGCAACAAAAGTCACTCCTCTA1020.12397447584320874No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGTTCTA1010.12275903980553023No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACACGGACTACAA1000.12154360376785171No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGGCTCACACCTATAATCCCATC980.11911273169249467No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACTGACGACATGGCTCACACCTAT980.11911273169249467No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGACACTGACGACATGGCTCACACCT970.11789729565481616No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGCT950.11546642357945912No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCTACACATAGAGTCTGGTGG940.1142509875417806No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGGACACTTTGGACTCTGCCTCT930.11303555150410209No Hit
CATAGATGTGGTCTCAGTGCCCTATGCACTGACGACATGGCTCACACCTA930.11303555150410209No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACACACTGACGACATGGCTCA920.11182011546642358No Hit
CATAGAATACAACACACTCTCTGCCCTGACGACATGGCTCACACCTATAA900.10938924339106654No Hit
CATAGAAGTGACCCTCAGCTCAGTGGCTCACACCTATAATCCCATCTATG880.10695837131570951No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCACTGACGACATGGCTCACACC870.10574293527803098No Hit
CATAGAGGCAGGTGGGTAGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG850.10331206320267396No Hit
CATAGAGAACAGCCCTGAGAGAATGGTTCTACACATAGAGAACAGCTAAA850.10331206320267396No Hit
CATAGATCACCCAGCCCATATTGCACTACATGGCTCACACCTATAATCCC850.10331206320267396No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)