FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804118

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804118
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12061
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG504241.80416217560733No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA5594.634773236050078No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG3893.2252715363568525No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC3062.5371030594478072No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG3022.5039383135726725No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG2361.956720006632949No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC1861.542160683193765No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA1741.4426664455683609No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT1180.9783600033164745No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1150.9534864439101235No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA1110.9203216980349889No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG1100.9120305115662052No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT990.8208274604095847No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT740.6135477986899925No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACAAATGATTTTTCCACTA710.5886742392836415No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGACATGGTTCTAC650.5389271204709394No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT600.497471188127021No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA580.4808888151894536No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC540.4477240693143189No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT500.4145593234391841No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA490.4062681369704005No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA470.38968576403283306No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG470.38968576403283306No Hit
CATAGATCATGGGACTTCAGCATGGCCACTGACGATCATTGTTCACTGCA460.38139457756404943No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG440.36481220462648206No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGACATGGTTCTACACA440.36481220462648206No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG440.36481220462648206No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA420.3482298316889147No Hit
CATAGATCCACGTGAGAATAAAGCATACAAGGGGTAAGGCGTACTGGTCT400.3316474587513473No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG390.32335627228256364No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG360.2984827128762126No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT360.2984827128762126No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA340.2819003399386452No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT330.27360915346986153No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT330.27360915346986153No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA320.26531796700107785No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC310.25702678053229416No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGACATGGTTCTACACA300.2487355940635105No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG280.2321532211259431No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG280.2321532211259431No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT280.2321532211259431No Hit
CATAGAGTCCAACTATTCCAGCACCAGACATGGTTCTACACATAGAGTGT260.21557084818837574No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC240.1989884752508084No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTGGGCCCCAGTGTGAATACTT230.19069728878202472No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA230.19069728878202472No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG230.19069728878202472No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG230.19069728878202472No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG230.19069728878202472No Hit
CATAGATCAAGGAAAACACCAGCCCAACACTGACGCTATACCACACTACA220.18240610231324103No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC220.18240610231324103No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG220.18240610231324103No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT210.17411491584445735No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC200.16582372937567366No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG200.16582372937567366No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG190.15753254290688998No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA190.15753254290688998No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG190.15753254290688998No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGCCCTCTCTGCTGTTCCTT190.15753254290688998No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGCTGAAGTGATGGGCTAGATCT180.1492413564381063No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG180.1492413564381063No Hit
CATAGACTCATTGCACTTTCCACAACTGTCGTCCCAACTGTCTCTGAAAA180.1492413564381063No Hit
CATAGATGTGTAGCCTGGGTCTGACACACCCACAGCCAGGAAAGAATCTA170.1409501699693226No Hit
CATAGATCATGGGACTTCAGCATGGCGGTAGCAGAGATCCCACCATTTGC170.1409501699693226No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTGTTTCCCCACTCAAAT170.1409501699693226No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA160.13265898350053892No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGACACTGACGCTATACCACAC160.13265898350053892No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA160.13265898350053892No Hit
CATAGACCAGCAGACACTCCCATCATTTGCCTGCTGAAGTGATGGGCTAG150.12436779703175525No Hit
CATAGAAGCCATGAACACAGGATTGAGACCAACGCTATACCACACTACAC150.12436779703175525No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTATGAGACCAAGTCT150.12436779703175525No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATTGCTTCTTG140.11607661056297155No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGAGAGCACCCACAGCCAGGAAAG140.11607661056297155No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGTCATTGTCGCTGTCCCATC140.11607661056297155No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTAAGCAGCATAATTTCCCA140.11607661056297155No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC140.11607661056297155No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTGAGGAGCTGAGTCATGGG130.10778542409418787No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG130.10778542409418787No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC130.10778542409418787No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCCACGCTGTCCTTCTCTG130.10778542409418787No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG130.10778542409418787No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCACACTGACGACATTGCT130.10778542409418787No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)