FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804122

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804122
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37845
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1836348.52160126833135No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA10392.7454089047430306No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT6301.6646848989298455No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC6291.6620425419474172No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC4021.062227506936187No Hit
CATAGACAGCTGACCAGAAAATGTTTCACACTGACGACATGGTTCTACAC2900.7662835249042145No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG2860.7557140969745013No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC2800.7398599550799313No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2770.7319328841326463No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT2570.6790857444840798No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGG2380.6288809618179416No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT2090.5522526093275202No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG1900.5020478266613819No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT1860.49147839873166865No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT1830.4835513277843837No Hit
CATAGAGAAGAGAAGGCGACAATGGCATGAACCTGGGAGGCGGAGCTTGC1810.478266613819527No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1790.4729818998546704No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG1720.4544854009776721No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT1690.4465583300303871No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT1630.4307041881358171No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA1630.4307041881358171No Hit
CATAGAGCTATCAGTATACTCCCACCATGATCACTTCAGTTGACTATAAG1490.3937111903818206No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA1430.37785704848725066No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCCGGGAAGGGGAGGTTGC1340.3540758356453957No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC1250.33029462280354077No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGAATTCTTGCCAGGGATCT1230.3250099088386841No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA1220.3223675518562558No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC1210.31972519487382745No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA1210.31972519487382745No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG1130.29858633901440085No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGGTGGGCATCAACCCTAAG1110.29330162504954416No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT1110.29330162504954416No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1050.27744748315497425No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGAGGAATTCTTGCCAG990.2615933412604043No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC980.2589509842779759No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTCACACCACTACACTCCAG950.25102391333069096No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG940.24838155634826264No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA910.24045448540097766No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG900.23781212841854932No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG870.22988505747126436No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC860.22724270048883605No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCAAGATTTATTGCAAAGAGCAAAA840.2219579865239794No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG820.21667327255912275No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG790.20874620161183774No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG760.2008191306645528No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG750.19817677368212444No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG740.19553441669969612No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG740.19553441669969612No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC730.1928920597172678No Hit
CATAGAATGCAGGAGAATATACACAGGTTATAGAATTAGCGGAGAGTGAG710.18760734575241114No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC670.17703791782269784No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG640.16911084687541286No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGAGAATTAGCGGAGAGTGAG620.16382613291055623No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG610.1611837759281279No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG590.15589906196327125No Hit
CATAGACAGGAGGAGGAAGAAGAGGATTGCTTGAGTCTGGGAGGTCAAGG590.15589906196327125No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG580.15325670498084293No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCATCAAGTCTCTGCTACC570.15061434799841458No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT570.15061434799841458No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC560.14797199101598627No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGATCTGAGCAAGGATAGCCCT550.14532963403355795No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC550.14532963403355795No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG530.14004492006870128No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT520.13740256308627297No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACACTGACGACATGGTTCTACACA520.13740256308627297No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT500.1321178491214163No Hit
CATAGATCATGGGACTTCAGCATGGCGGTATTTGCAGATTTGGACCTGCG490.12947549213898796No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTACAGATTTGGACCTGCG480.12683313515655964No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC450.11890606420927466No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTGACGACATGGTTCTACACAT440.11626370722684636No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGTTTTGGACCTGCG440.11626370722684636No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG430.11362135024441802No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT430.11362135024441802No Hit
CATAGACAGCTCACAGACTGCATACTACACTGAGACATGGAGACAGCCGC420.1109789932619897No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACGGGTGGTCTTACTCTTCCC420.1109789932619897No Hit
CATAGGTCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG420.1109789932619897No Hit
CATAGAGGGTGTTTTTCGGTGTCACATATACACCATGGAATACTACACAG420.1109789932619897No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG410.10833663627956137No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA400.10569427929713304No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTACG400.10569427929713304No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG390.10305192231470472No Hit
CATAGACAGGAGGAGGAAGAAGAGGATCTATGGGGACATGGATGAAGCTG390.10305192231470472No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGTACCTGCG390.10305192231470472No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG380.1004095653322764No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)