FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804127

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804127
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115904
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1400212.08068746548868No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA63765.501104362230811No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT49724.289757040309222No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG45573.931702098288239No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA36373.1379417448923244No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT34192.949855052457206No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG23192.000793760353396No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT22351.9283199889563778No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT17881.542655991165102No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA17701.5271258972943125No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG16461.4201408061844285No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA16411.4158268912203202No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA15911.372687741579238No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGGCAACATATCAG13541.168208172280508No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA12541.0819298729983435No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA11971.0327512424075096No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT11460.9887493097736058No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA10540.9093732744340144No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9790.8446645499723909No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC9280.800662617338487No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT8470.7307771949199338No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT8080.6971286581998896No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA7810.6738335173937051No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG7130.6151642738818333No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC7090.6117131419105467No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7020.6056736609607951No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT6940.598771397018222No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT6620.5711623412479293No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT6400.5521811154058531No Hit
CATAGACACACTGACAATTTGCACCTGTACGGCAACATATCAGAAGCATC6300.5435532854776367No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT6130.5288859745996687No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG6040.5211209276642739No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT6020.5193953616786307No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGGAATCTTTGGGAGGCTAT6000.5176697956929873No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT5900.5090419657647709No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC5650.48747239094422967No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT5640.48660960795140806No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5320.45900055218111546No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC5130.44260767531750417No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT4840.4175869685256764No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4760.4106847045831033No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT4590.39601739370513533No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGCACAAGGAGGAGCTGACTTA4570.394291827719492No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCAGGGCAGAGAGTGTGTTG4390.3787617338487024No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT4290.3701339039204859No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4150.35805494202098287No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT4150.35805494202098287No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT3990.34425041413583657No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGAAGTGTATTAAT3970.34252484815019324No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC3900.33648536720044175No Hit
CATAGATCCCATACTCCTCCATTACCCTACGATAGCGAGAAGAGTGGAGG3870.3338970182219768No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG3850.33217145223633354No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3730.3218180563224738No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT3690.3183669243511872No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT3670.3166413583655439No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGCATTCTCTCAGGGCTGTTCT3640.314053009387079No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTACGGCAACATATCAGAA3570.30801352843732743No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT3570.30801352843732743No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3480.3002484815019327No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTAGTGTCTAGCACTATTCTCT3340.2881695196024296No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGATAGCGAGAAGAG3180.2743649917172833No Hit
CATAGAGTCCTTCCCTCTCACACATGTCACATAGGGCACTGAGACCACAT3170.2735022087244616No Hit
CATAGAAACAGCAAAGCCCTCCACCAATAGACCTTTTTCTGTAGTCAAGT3090.2665999447818884No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT3080.2657371617890668No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGACGGCAACATATCAGAAG3020.26056046383213693No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGTTTTCTGTTTACTCGGAGATTTG3010.2596976808393153No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCTGTTTACTCGGAGATTTGACTG2970.2562465488680287No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA2870.24761871893981224No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGTTTCTGTTTACTCGGAGATTTG2870.24761871893981224No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAAGGAATCTTTGGGAGGCTATTAG2870.24761871893981224No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2850.24589315295416897No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGGAGGAGAATGATA2830.2441675869685257No Hit
CATAGATCCCATACTCCTCCATTACCCTGTACGGCAACATATCAGAAGCA2820.24330480397570403No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTAGGAGGAGCTGACTT2760.23812810601877418No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCAGGGCAGAGAGTGTGTT2740.23640254003313085No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGAGTGTGGGAAAGGTATGTGGC2720.23467697404748758No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCACTGAGCTGAGGGTCACTTCT2710.23381419105466594No Hit
CATAGATCACCAGATGCCAGTTGTGCCACATAGAAGAGTGTGCTGTGTCT2700.23295140806184428No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC2690.2320886250690226No Hit
CATAGATTCAACCAGCCATCCCCAATGTGTCCATCCAGTCCAGCTCCTTC2670.23036305908337934No Hit
CATAGAGTCCTTCCCTCTCACACATGTATATCTAGGAGTAGAACTGCTGG2670.23036305908337934No Hit
CATAGAACCAACCTCTCTATCTCCGTAGAGGAGAATGATATTGTTGCAGA2540.21914688017669795No Hit
CATAGAGCCCCCAGAGAAGAATGACCTCTAGCCAAATTCCTTACCGATCT2510.21655853119823304No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAATCTTTGGGA2490.2148329652125897No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT2490.2148329652125897No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2430.20965626725565986No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTACGATAGCGAGAAGAGTGGAGGC2380.20534235229155165No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTAGAGAAGTGTATTAATT2350.20275400331308668No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTGTAGAACCATGTCGTCAGTGT2290.1975773053561568No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTTGGGAAAGGTATGT2260.19498895637769187No Hit
CATAGAGGCACGATCTTGTTTCACTGTTCTCATAGGGCACTGAGACCACA2130.18377277747101048No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT2110.1820472114853672No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTATCAGGGCAGAGAGTGTGTTG2070.1785960795140806No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAACCTCCCACCCCAGCTGTCTATG2040.1760077305356157No Hit
CATAGACCCCCTTGAGTTCACTGGACACACTGACGGCAACATATCAGAAG2020.1742821645499724No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGCTCCTTCTCACACAA2010.17341938155715075No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2000.1725565985643291No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA1980.1708310325786858No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT1950.16824268360022088No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1940.16737990060739924No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGTAGCAGAGACCTTTTTCTG1920.16565433462175594No Hit
CATAGACCCCCTTGAGTTCACTGGACTACGGCAACATATCAGAAGCATCT1880.16220320265046934No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1880.16220320265046934No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGGAGAATGATATTGTTGCAGA1870.1613404196576477No Hit
CATAGACCACACACACAACTGAGAGTCACTGAGCTGAGGGTCACTTCTAT1870.1613404196576477No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1840.1587520706791828No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGCTAGCACTATTCTCTG1830.15788928768636112No Hit
CATAGATATTCTGCCCCCTCCTCTCCAGAGCAGCATTCTCTCAGGGCTGT1790.15443815571507455No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG1790.15443815571507455No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT1750.15098702374378797No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1730.14926145775814467No Hit
CATAGAGGCACAGGGATAATGAGGGAGGGGGTCACTGACAGGTCTTAAAG1680.14494754279403643No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTCTATAGGAAACATTGG1650.14235919381557152No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1560.1345941468801767No Hit
CATAGAGGCACGATCTTGTTTCACTGTATAGAAGTGTATTAATTATCTAT1470.1268290999447819No Hit
CATAGATATTCTGCCCCCTCCTCTCCTTCTACACATAGGAGGAGCTGACT1470.1268290999447819No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTCCCCAGGTAG1390.11992683600220873No Hit
CATAGATATTCTGCCCCCTCCTCTCCTGTTTCTGTTTACTCGGAGATTTG1390.11992683600220873No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA1350.11647570403092214No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA1280.11043622308117064No Hit
CATAGACCCCCTTGAGTTCACTGGAGGTCACTGACAGGTCTTAAAGCTCT1270.10957344008834898No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGCAGAGACTTGGTCTCATAGAGG1260.10871065709552732No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1250.10784787410270569No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1220.10525952512424075No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTGTTTACTCGGAGATTTG1200.10353395913859746No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)