FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804132

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804132
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63461
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1295520.414112604591796No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC37415.8949591087439535No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC31494.962102708750256No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC16092.5354154520098957No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA15892.5039000330911896No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA15802.489718094577772No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT14222.240746285119995No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT13782.171412363498842No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG13332.1005026709317534No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA10481.6514079513401934No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA10351.6309229290430345No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT9561.5064370243141456No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA9041.4244969351255101No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA8211.2937079466128802No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG7601.197585918910827No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA6601.0400088243172974No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG6150.9690991317502088No Hit
CATAGATTCTGAAGAAATCAGATAGAGAGAAACACACTGGAGACAGCCGC5550.8745528749940908No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGGAGACAGCCGCTCA5380.8477647689131907No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC5210.8209766628322906No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT4820.759521595940814No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG4580.7217030932383669No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT3870.6098233560769607No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA3760.5924898756716723No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC3480.548368289185484No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA3330.5247317249964545No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT3190.5026709317533603No Hit
CATAGAAACCCCAAAGGCTATGTTCATTCTATGCCTTCATTCTGCCTGCA3180.501095160807425No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA2830.44594317769968955No Hit
CATAGAGATGTTTGATAAGCAGGGTGACAGTCAATGGGCAAGCAATGACA2800.4412158648618837No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT2790.4396400939159484No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA2730.43018546824033654No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT2720.42860969729440135No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2330.3671546304029246No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT1960.30885110540331856No Hit
CATAGAACCTCTTTTGGGGCAAAGTTATATACCCACATGTATTAGTTTGC1850.2915176249980303No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT1730.2726083736468067No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAG1730.2726083736468067No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTGGAGA1580.2489718094577772No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1560.2458202675659066No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATCTGTTATTCAAAGGTTTT1490.23478987094435952No Hit
CATAGATTCTGAAGAAATCAGATAGAGAGAAACGCACTGGAGACAGCCGC1490.23478987094435952No Hit
CATAGATCATGGGACTTCAGCATGGCCCCGCCCTGCCCTGCTCTCCCAAC1480.23321409999842424No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG1340.21115330675533003No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGGAGACAGCCGCTCACCT1310.20642599391752417No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA1250.19697136824191236No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTGGTGGAGACAGCCGC1250.19697136824191236No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACCCCAAGTGAGGACCAGGGTG1200.18909251351223585No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTGGAGACAGCCGC1190.18751674256630055No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT1160.18278942972849466No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT1150.18121365878255938No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1140.17963788783662407No Hit
CATAGATGCCCTTTTTGTGTACTTCCACATGGTTCTACACATAGATGCCC1130.17806211689068877No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1050.16545594932320637No Hit
CATAGATGTCCATCATGTGGAAGCTGTACCATGTTTTCATCCTGCTTCTA1000.1575770945935299No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC1000.1575770945935299No Hit
CATAGAGAGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA920.1449709270260475No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG920.1449709270260475No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA860.13551630135043571No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATATCCCCAGAAA850.13394053040450038No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGACAGCCGCTCACCTCTATGAG850.13394053040450038No Hit
CATAGACAGGGAGGCGTATAAGTGATGTACGGTAGCAGAATTACCTCTGG800.1260616756748239No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG780.1229101337829533No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTTGTGGAGA770.12133436283701801No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA740.11660704999921212No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG740.11660704999921212No Hit
CATAGATCATGGGACTTCAGCATGGCTCTACACATAGATCATGGAGACAG740.11660704999921212No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG720.11345550810734151No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC690.10872819526953563No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA690.10872819526953563No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTGGTGGAGACAGCCGCT680.10715242432360034No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG680.10715242432360034No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATTAGTCTTGCACAGATCATTT660.10400088243172972No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC660.10400088243172972No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT650.10242511148579442No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG640.10084934053985913No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC640.10084934053985913No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)