FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804134

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804134
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36226
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1313136.247446585325456No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA16154.458123999337492No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC13733.790095511511069No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG11773.249047645337603No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG10582.920554298017998No Hit
CATAGATCACGTAGAAACTGGAGAGGCCAGTGCAGTGGGGAGGCAGGCTG10452.884668470159554No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG9792.7024788825705293No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC5771.5927786672555622No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG5161.4243913211505548No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA4521.2477226301551372No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGAGAGCTTCACAACCTTGAAAGG4241.170430077844642No Hit
CATAGACACAACAGAGAGAACGGGCTCCGAGGTCAGGAAGGAACCTGCTC3610.9965218351460278No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA3600.9937613868492243No Hit
CATAGATCAAGGAAAACACCAGCCCATGCAAACTGTTCTAGGCAGAAGAA3500.9661569038811904No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAAAGCTGGACCCTCTCTGGG3430.9468337658035665No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT3340.9219897311323358No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT2820.7784464196985591No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT2460.6790702810136366No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT2330.6431844531551923No Hit
CATAGACCCAGATGCTGTCCCACTAACTATAAGCCATAGGACAATGAATC2110.5824545906255175No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2040.5631314525478938No Hit
CATAGACATTTAATCCTCACAATGACCCATCATAATGTTGGTCTAAGATG1770.4885993485342019No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA1740.48031800364379174No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA1700.4692762104565782No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG1610.44443217578534755No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGCTATACCACACTACA1520.4195881411141169No Hit
CATAGAAGCCATGAACACAGGATTGAAAAAAGATTGATAGACTACAGGAA1490.41130679622370675No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA1340.36990007177165574No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG1300.35885827858444214No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC1260.3478164853972285No Hit
CATAGATGGCCAAGATACGAGCACATAATAATTCTAACTCAGTCAAATTT1220.3367746922100149No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT1170.3229724507259979No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA1130.3119306575387843No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTGTTCAATTAGGAAAAT1040.2870866228675537No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGGGGTTACCACCTTGCAAGA1040.2870866228675537No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA980.2705239330867333No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG900.24844034671230608No Hit
CATAGAGTCCAACTATTCCAGCACCATTTTCTAAAAAGGCTATATTTTGT890.24567989841550267No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG860.23739855352509245No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT830.22911720863468227No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA810.2235963120410755No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC770.21255451885386187No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG760.20979407055705845No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC750.2070336222602551No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGTGGCTCACATCTCTAATCCCAG740.20427317396345168No Hit
CATAGATCCACGTGAGAATAAAGCATACAAATGAGAAACCTGGATGCTTC730.20151272566664827No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG690.19047093247943467No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG630.17390824269861424No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG620.17114779440181085No Hit
CATAGACCTCCGACAGTTTTTATGCACTGAAATAATACTAAATTAAAGCT610.16838734610500744No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG600.16562689780820405No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT580.16010600121459725No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG560.15458510462099043No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG560.15458510462099043No Hit
CATAGAAAGGTGCAATCAAGCCAGTTAATGACACTTTCAGACTCAGCTTT540.14906420802738365No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA540.14906420802738365No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG530.14630375973058024No Hit
CATAGATCATGGGACTTCAGCATGGCTGCCCAGTCTGGAAAGTGAGGAGT510.14078286313697344No Hit
CATAGATCATGGGACTTCAGCATGGCCATGGTTCTACACATAGAGTGTCT490.13526196654336664No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGATCAGCCTGGAAGAGGAAGT480.13250151824656323No Hit
CATAGATCCACGTGAGAATAAAGCATACAAAGGCTCTAGAAAAGCAACCA460.12698062165295643No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG450.12422017335615304No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGTCATTGTCGCTGTCCCAT430.11869927676254623No Hit
CATAGACCGCTTCCCAATTTTTGTAACATGCTTCCTGTTCCACTGAGGCA410.11317838016893943No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA400.11041793187213603No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGGTTTGGGTGGTGGCGCTGTCCG390.10765748357533264No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG390.10765748357533264No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG380.10489703527852923No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG380.10489703527852923No Hit
CATAGAAGGACAAAGACATTTAGGACCCCCTTCCCCACACCCTCTTCTTC380.10489703527852923No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACAGCAGTTCATCTGACAT370.10213658698172584No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG370.10213658698172584No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAAGCCAAACAATATAAAAGTCC370.10213658698172584No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)