FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804135

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804135
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36226
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1261434.8202948158781No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA16164.460884447634296No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG13763.7983768564014793No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG11493.1717550930271075No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTAGGATTTGAGCTCATG10282.8377408491138962No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG10132.796334124661845No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG9782.6997184342737257No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC5861.6176227019267928No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG5081.4023077347761277No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA4551.2560039750455474No Hit
CATAGACCCCATGACTCAGCTCCTCATTCTAAAAAAGAACGATGAAATAC4021.109700215314967No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA3590.9910009385524209No Hit
CATAGAGGGGCCTGGTTATTACTTGGATGGGAGCCAGAGCCTGGCCTGAG3440.9495942141003698No Hit
CATAGATTCAGAGAAGGACAGCGTGGTCACATAGGTTGCTAGACAGATTT3340.9219897311323358No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGGTGCGATGGCTTTCTGACT3290.9081874896483189No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT3280.9054270413515154No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT2790.7701650748081488No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT2480.6845911776072434No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG2200.6072986252967482No Hit
CATAGATGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGCAACT2140.5907359355159278No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2040.5631314525478938No Hit
CATAGACCCTCTCTTACCCTTCCACCTTCTGTCATGAAATGATGCAGCAA1880.5189642797990394No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT1710.4720366587533815No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG1710.4720366587533815No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT1670.4609948655661679No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG1620.447192624082151No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCCATGCTGAAGTCCCA1420.39198365814608294No Hit
CATAGATGCCACCACACCCAGTTAATTTTGTCTTTTTAGTAGAGATGGGA1390.3837023132556727No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT1330.3671396234748523No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1260.3478164853972285No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG1250.34505603710042515No Hit
CATAGAGCAGCTTGAATTCTCCTCAGAAAATGGGATTTTCTTTTCTATTG1240.3422955888036217No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT1170.3229724507259979No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGCTGGTGTTTTCCTT1150.3174515541323911No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1090.3008888643515707No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT1070.2953679677579639No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAGGAAATGATTTCCCTTGAA1000.2760448296803401No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT980.2705239330867333No Hit
CATAGATCTAGCCCATCACTTCAGCATAAACATATTTCCCCTTTGGGATT930.2567216916027163No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA880.24291945011869928No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG870.24015900182189587No Hit
CATAGATCTCCTCTCTGTAATGCACCAGCTTCGATAAAGATGCAGAGGCA860.23739855352509245No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT840.23187765693148568No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA830.22911720863468227No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG810.2235963120410755No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTGTTAATATAGAAGAGACACA790.21807541544746867No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA760.20979407055705845No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC760.20979407055705845No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC760.20979407055705845No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG750.2070336222602551No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGGCAACTTGCTTGTCTCAATCTCCT740.20427317396345168No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCACGCAGAGCCTTCAGGTCA730.20151272566664827No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA730.20151272566664827No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTATGCTTTATTCTCACGTGGATC680.18771048418263125No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGCTCAGGCTGGTCTTCAGATTCGT590.16286644951140067No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT590.16286644951140067No Hit
CATAGACCTCCCATGGTTCCTGATGATCTCAGGATAAAGTCTAAACACCT560.15458510462099043No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA540.14906420802738365No Hit
CATAGAACACCTGAACTACATAGCGGATACATAACTTCTGGTAGCACTGG530.14630375973058024No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAGGTCTATCTGCCCCATTTCTGTG520.14354331143377685No Hit
CATAGACCCCATGACTCAGCTCCTCACTTCCTAGATGGGATGGCGGCCGG500.13802241484017005No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT490.13526196654336664No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA490.13526196654336664No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA480.13250151824656323No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA480.13250151824656323No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA460.12698062165295643No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA420.11593882846574284No Hit
CATAGATGGGACAGCGACAATGACAGTGTGCCATGCTGAAGTCCCATGAT420.11593882846574284No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTTATGTGTAGAACCATGTC400.11041793187213603No Hit
CATAGATGGTATTTGAGTGGGGAAACAGATCCAAACCATATCATACCCCA380.10489703527852923No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCCCACAGTGGCCTTTCCCAG380.10489703527852923No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGCCCCAAATGGCCTCGGGTCGGTGG370.10213658698172584No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGTACATTTAACATTTCTACCT370.10213658698172584No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGGGGTCCTAAATGTCTTTGTCCTTC370.10213658698172584No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)