FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804136

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804136
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80819
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3316741.038617156856674No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG33764.177235551046165No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC31963.954515646073324No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT14991.8547618753016No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA14801.8312525519989111No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG14261.7644365805070588No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA9521.1779408307452455No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT8751.082666204729086No Hit
CATAGACTTCAGCCCTCACAAGCCTTACACTGACGACATGGTTCTACACA8731.0801915391182768No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT7180.8884049542805528No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT6050.7485863472698252No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT5710.7065170318860664No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT5510.6817703757779731No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACAGTTCATTGTATTCTCTATGAG5310.6570237196698796No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA4950.6124797386753115No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC4770.5902077481780275No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT4560.5642237592645294No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTCTATGGAGGATGATCA4490.5555624296266967No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC4350.5382397703510313No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA4250.5258664422969846No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT4040.4998824533834866No Hit
CATAGATGAAAGACAAGCAGGGAAGCACACTGCCATCACAGTTCATTGTA3740.4627624692213465No Hit
CATAGAGCTATCTGGCAAAAACCCATCACACTGCCATCACAGTTCATTGT3710.45905047080513245No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT3660.4528638067781091No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT3440.4256424850592064No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA3380.4182184882267783No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT3170.3922344993132803No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC2990.36996250881599624No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG2950.36501317759437757No Hit
CATAGAGGTGTCCTTTCCCCACTTTAACACTGCCATCACAGTTCATTGTA2840.35140251673492623No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT2810.34769051831871217No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2660.32913052623764216No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGTTTTGTCGAAGA2520.31180786696197677No Hit
CATAGAGGTGTCCTTTCCCCACTTTATATTTTGTTTGCTTTGTCAAAGAG2490.30809586854576276No Hit
CATAGAAAGTCTGGACCAAGTGCCTCATGACTGTAATCCCACAACTTTGG2430.3006718717133347No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT2420.2994345389079301No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC2390.29572254049171603No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC2350.29077320927009737No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGCTTTCGTTTGCTTTGTCGAAGA2290.28334921243766936No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC2200.2722132171890273No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA2140.26478922035659935No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2070.2561278907187666No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG1920.2375678986376966No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1910.23633056583229192No Hit
CATAGAACTCCATCATAAGTCAAAGAGCACACTGACGACATGGTATATTT1830.22643190338905456No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACATGGAGGATGATCAAT1640.20292258008636582No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1540.19054925203231915No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA1490.18436258800529579No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1470.18188792239448645No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1440.17817592397827245No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1430.17693859117286775No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGGTTCCATGTGTGTGCGATGTTC1330.16456526311882108No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1330.16456526311882108No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGACGACATGGTATAT1330.16456526311882108No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1330.16456526311882108No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1310.16209059750801172No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1270.15714126628639305No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTCGTTTGCTTTGTCAAAGA1260.15590393348098838No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1250.15466660067558372No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCGCTTCTGTAATCTCAGC1240.15342926787017902No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC1210.14971726945396505No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACCGTATGGAGGATGATCAA1210.14971726945396505No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1150.14229327262153701No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1140.14105593981613235No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTGTGTGCCTGTAGTCCCAGC1110.13734394139991835No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTTCTACA1100.13610660859451365No Hit
CATAGACACATGTAGGATGGGGTGGCACATGCCTGTAGTCCCAGCTATTC1100.13610660859451365No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1080.13363194298370432No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1020.1262079461512763No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCAAAGA1010.12497061334587165No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG980.12125861492965763No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGTCTGTAATCCTAGAACTTT980.12125861492965763No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGACAGGATGCGCAGATGGTCT950.11754661651344363No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG900.11135995248642028No Hit
CATAGACACATGTAGGATGGGGTGGCTGGAGGATGATCAATGCTGCTTCT900.11135995248642028No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAACTACAAAAAAATT870.10764795407020625No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCCAGCACTTT850.10517328845939691No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCCGTAATCCCAGCACTTT840.10393595565399226No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG840.10393595565399226No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG830.10269862284858758No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATACCAGC810.10022395723777823No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT810.10022395723777823No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)