FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804139

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804139
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences162302
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG96245.92968663355966No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT70554.3468349126936205No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT68624.227920789639068No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG62143.828665081145026No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT48122.96484331677983No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT40352.4861061477985484No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT39662.443592808468164No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG39082.407856958016537No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT37542.3129721137139407No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG30781.8964646153466995No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT29531.8194476962699164No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT26271.618587571317667No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG21831.3450234747569347No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT21301.3123683010683789No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT20771.2797131273798228No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC19201.1829798770193836No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG17001.047430099444246No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCCTCTTCACCTCCCAGATCT16911.0418848812707175No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG16641.0252492267501325No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT14870.916193269337408No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG12590.7757144089413562No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT12150.7486044534263288No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG11560.7122524676220873No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT11380.7011620312750305No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC11310.6968490838067306No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG9920.6112062697933482No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA9800.6038126455619771No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC9730.5994996980936773No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9400.5791672314574066No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC9200.5668445244051213No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG8960.552057275942379No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC8950.5514411405897648No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG8820.5434313810057794No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT8730.537886162832251No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG8090.4984535002649382No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC7690.4738080861603677No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT7630.4701112740446821No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA7550.4651821912237681No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT7500.4621015144606967No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT7420.45717243163978266No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACACTGCTCACGATGGTATTACAT6760.4165074983672413No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT6690.4121945508989415No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATACGGTTGCAGGATGAATGGGGA6640.4091138741358702No Hit
CATAGAGTTCCAGCAAAATGAAGGGGACGCATTCTTTCTCCAGACCTTCA6570.40480092666757034No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA6550.4035686559623418No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT6510.40110411455188477No Hit
CATAGACTCAGAACTGGCTCTAATTCCTATCTGCTCACGATGGTATTACA6340.3906298135574423No Hit
CATAGAACATCTCCCTGTTCCTCCCACACTGCTCACGATGGTATTACATG6090.37522642974208575No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTTGCCAAGTAAGTC6080.37461029438947147No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6040.3721457529790144No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT6020.3709134822737859No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG5970.3678328055107146No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT5930.3653682641002575No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTGATTTAGGAAGCAGGGTTCTAT5900.36351985804241477No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTACGGTTGCAGGATGAATGGGG5880.36228758733718625No Hit
CATAGAACCTCAAGCCGGAAAACCTTGCCAAGTAAGTCTACAAAGAACCT5370.33086468435385885No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT5340.3290162782960161No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGGATCTCAGAGTTAGCTTGC5110.314845165185888No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC4930.3037547288388313No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGAGTGGGAGTCATTCATGATCT4870.30005791672314575No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTTAGGCTACTTGGGGGTCTCT4850.2988256460179172No Hit
CATAGACAATTTCAGTGCGGCCGATGCCAAGTAAGTCTACAAAGAACCTC4850.2988256460179172No Hit
CATAGACACTTGACCATGCCCTTGTTCGGTTGCAGGATGAATGGGGACAT4840.29820951066530293No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACACTGCTCACGATGGTATT4800.2957449692548459No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC4720.2908158864339318No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4710.29019975108131757No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCTGCTTTTACAAACTCAAGTGA4670.28773520967086047No Hit
CATAGATGGCCCACTGACATTTTCCTCTGCTTTTACAAACTCAAGTGATT4630.2852706682604034No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4520.2784931793816466No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG4500.277260908676418No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTACATGTACACGGCA4430.2729479612081182No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4400.2710995551502754No Hit
CATAGAACTGACCATACACTTGCCCTATGGATCTCAGAGTTAGCTTGCCT4340.26740274303458983No Hit
CATAGAAGGGGTGATGCTCTGATGGAAGGGGTGATGCTCTGAGGAAGTGA4310.265554336976747No Hit
CATAGAACCTCAAGCCGGAAAACCTTACACTGTCTGGCACAATGAGGCAA4300.2649382016241328No Hit
CATAGAACTGACCATACACTTGCCCTGGATCTCAGAGTTAGCTTGCCTCT4290.2643220662715185No Hit
CATAGAGGCCATTCTTCTCATGCTGGTACGGTAGGTGGCTTCTGGTGCAT4270.26308979556629003No Hit
CATAGATGGCCCACTGACATTTTCCTGGTTCTACAATAGATGTGGTTGCA4240.2612413895084472No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTGGTAGGTGGCTTC4210.2593929834506044No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC4120.25384776527707603No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCATAGACACTTGAAAGCTCCCTG4000.24645414104570493No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC3900.2402927875195623No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT3890.23967665216694806No Hit
CATAGACCAGGACAATCACAGGGCACACTTAACACCTCTATAGGAGTTGA3810.23474756934603394No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT3790.23351529864080542No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3790.23351529864080542No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA3750.23105075723034835No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC3730.22981848652511983No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG3590.22119259158852014No Hit
CATAGATGGCCCACTGACATTTTCCTGGTTAGACAGGGGTGTGGTGTTCT3410.21010215524146347No Hit
CATAGATGAGGGATGTAGGCTGTACACTTTGCGTGTATGTGAGTGCCAAA3400.20948601988884916No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTAGGATGAGATAATTGCC3330.20517307242054936No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAATCTGCTTTTACAAACTCAA3330.20517307242054936No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC3320.2045569370679351No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTAGGTGGCTTCTGGTGCA3310.2039408017153208No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3270.20147626030486376No Hit
CATAGAACTCTTACCCTTTTGCCAGGTACGGTAGGTGGCTTCTGGTGCAT3240.199627854247021No Hit
CATAGACACTTGAAAGCTCCCTGGATCTATGTGTAGAACCATGTCGTCAG3220.19839558354179243No Hit
CATAGACACTTGACCATGCCCTTGTTGATTTAGGAAGCAGGGTTCTATGT3160.1946987714261069No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT3150.19408263607349263No Hit
CATAGACCAGGACAATCACAGGGCACCAAGGTCAAGGGCAGGGATTCTAT3120.19223423001564985No Hit
CATAGACACTTGACCATGCCCTTGTTCTGGTCTCATAGACACTTGAAAGC3110.19161809466303556No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT3040.18730514719473573No Hit
CATAGACACTTGACCATGCCCTTGTTCAGAGACTTGGTCTCATAGACACT3030.18668901184212147No Hit
CATAGAACTGACCATACACTTGCCCTCTGCTTTTACAAACTCAAGTGATT3020.1860728764895072No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGTGCACAGTTTGGAATGACTCTA2960.18237606437382164No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2950.18175992902120738No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC2920.1799115229633646No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTTGCAGGATGAATGGGGAC2880.17744698155290753No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2880.17744698155290753No Hit
CATAGAACCAACCAATAATAATGTGCTTGTAGACTTCTGCTTTTACAAAC2870.17683084620029327No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCACACTGAACGAAATTTAG2680.1651242745006223No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT2640.16265973309016524No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTTGTGTGGGTAGAATCT2640.16265973309016524No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT2600.1601951916797082No Hit
CATAGAGGGATGGTATCAGAGAAGGCTAACTTCGCCTGCCTTTCTCTATG2590.15957905632709393No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2570.1583467856218654No Hit
CATAGAAACTCTGAGACAGCTAACATTTAAATGTTTGCTATTACGAGGAT2560.15773065026925115No Hit
CATAGAACTCTTACCCTTTTGCCAGGTACGGTTGCAGGATGAATGGGGAC2470.15218543209572277No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2440.15033702603788002No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG2390.1472563492748087No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGGGTAGAATCTTGA2320.14294340180650886No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2250.138630454338209No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT2210.136165912927752No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2180.13431750686990918No Hit
CATAGAAGGAGCTGGGAGTTGAGATAGGAGTTGACAAACGACAGCTTCTA2080.12815615334376657No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT2070.1275400179911523No Hit
CATAGATGAGGGATGTAGGCTGTACACGTACGGTTGCAGGATGAATGGGG2040.12569161193330952No Hit
CATAGATGGCCCACTGACATTTTCCTTCAGGAGTTGACAAACGACAGCTT2000.12322707052285246No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGCAGCTCCTCTTCTCTTCCCTC1960.1207625291123954No Hit
CATAGAACTGTCCCCTACTTTTCACCACACTGAACGAAATTTAGGTGAGC1960.1207625291123954No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG1900.11706571699670984No Hit
CATAGAGAAGGAAAACTGGGCTGTGACACCAAAAGCACAAGTTCTATGTG1830.11275276952841No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTTGCAGGATGAATGGGGA1820.11213663417579574No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAATTCAAGAAAGAAAACCCACAAA1810.11152049882318148No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1730.10659141600226738No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC1690.10412687459181033No Hit
CATAGATCTACTCCTACAATCTTGGCAAAAGGGTAAAGGCAGCTCCTCTT1670.10289460388658181No Hit
CATAGACACTTGACCATGCCCTTGTTCGGTCTCATAGACACTTGAAAGCT1650.10166233318135327No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTACACTGCTCACGATGGTAT1630.10043006247612477No Hit
CATAGAAAAGGGAGGGATTACGGGTGTTCTCTTCTTGTCCCCTATTACTG1630.10043006247612477No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTTGAACGAAATTTAGGT1630.10043006247612477No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)