FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences147777
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4368429.560757086691435No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGATCTATCCAGGAATTTTATT50323.4051307036954332No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC44142.986933013933156No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT39682.685126914201804No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT30652.0740710665394477No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC26691.8060997313519696No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA26251.776325138553361No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA24261.641662775668744No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA21701.4684287812041115No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA21431.4501580083504197No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT20411.3811350886809177No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA17691.1970739695622459No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC15661.0597048255141193No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA14300.9676742659547831No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT13830.9358695872835421No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT13810.9345161967017871No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA13350.9033882133214235No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA11010.7450415152560954No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA9980.6753419002957158No Hit
CATAGAGCAACAGGGACTCTCATTCACTGCTGGTGGGAATGCAAACTGGA9260.626619839352538No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG8910.6029355041718264No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTCAATAAATGGGGGCAAGGAA8800.5954918559721742No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT7430.5027846011219608No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG6710.4540625401787829No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGGAGACAGCCGCTCACCTCTA6660.4506790637243956No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA5760.3897764875454232No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC5060.3424078171840002No Hit
CATAGATGTATACAAGCTGTCACAGACAACATTTTTCTTCATTCAGCAAC4920.33293408311171563No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGACTGATACAGGAAGGCC4890.3309039972390832No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC4760.3221069584576761No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT4560.3085730526401267No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG4130.2794751551323954No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGGAGACAGCCGCTCA3680.24902386704290924No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGATCTATCCAGGAATTTTATTT3530.23887343767974717No Hit
CATAGATTGGAACTTTGCCAGCCTTAGTATACGTGAATGTGGATCAGAAC3500.23684335180711477No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT3090.20909884488113845No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA3070.20774545429938354No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA2830.19150476731832422No Hit
CATAGAGAGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA2820.19082807202744675No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC2810.1901513767365693No Hit
CATAGAAACCCCAAAGGCTATGTTCATTCTATGCCTTCATTCTGCCTGCA2800.18947468144569182No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA2720.18406111911867207No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT2610.17661747091901986No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA2480.16782043213761275No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA2480.16782043213761275No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG2480.16782043213761275No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2360.1597000886470831No Hit
CATAGAACCTCTTTTGGGGCAAAGTTTATTGACCCAGGTCCCCAAATCTA2260.15293313573830838No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAATA2240.15157974515655345No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTGGAGA2210.14954965928392105No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG2160.1461661828295337No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA2140.14481279224777877No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2130.14413609695690127No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA2120.1434594016660238No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG2100.14210601108426885No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2050.13872253462988152No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGATCTATCCAGGAATTTTAT2020.1366924487572491No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT2020.1366924487572491No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1960.13263227701198427No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1950.1319555817211068No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCTGTGAGTTGCTGATGCAT1860.12586532410320958No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCCGTCTCTA1810.12248184764882221No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1790.12112845706706728No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG1780.12045176177618981No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTTGCGTTTTTAGTAGAG1710.11571489474004751No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1680.1136848088674151No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1680.1136848088674151No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA1680.1136848088674151No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGACAGCCGCTCACCTCTATGAG1670.11300811357653762No Hit
CATAGATCATGGGACTTCAGCATGGCGAATCCTTTCCCTCACTCTCTCCA1650.11165472299478267No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC1600.10827124654039533No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT1600.10827124654039533No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG1560.10556446537688545No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGATAGAATCCTTTCCCTCACT1540.1042110747951305No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA1530.10353437950425302No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1510.10218098892249808No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1500.10150429363162063No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)