FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804144
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences167274
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG159459.532264428422828No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA134408.0347214749453No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTTCAGTTGACTATAAGAAA126367.5540729581405355No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC103646.1958224230902585No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC76754.5882803065628845No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA76124.550617549649079No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA67654.044262706696797No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG66303.963556799024355No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA64703.8679053528940543No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG60333.606657340650669No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC59393.550462116049117No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG39122.338677857885864No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT37792.259167593290051No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACTTCAGTTGACTA26321.5734662888434545No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT24501.464662768870237No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG18871.1280892427992395No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT18541.108361132034865No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC14910.8913519136267442No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG14730.8805911259370852No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC13520.808254719801045No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT12260.7329292059734328No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT11400.6815165536783959No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTTTTCTCTTCTTGGCATCT11190.6689623013737939No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTCAGACATGTTTCCTAGTT10780.6444516183029042No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA10660.6372777598431316No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT9830.5876585721630379No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC9590.5733108552434928No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC8790.5254851321783421No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG8730.5218982029484559No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT8450.505159199875653No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGACATGGATGAAGC8210.49081148295610794No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT6280.3754319260614321No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC5810.34733431376065615No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGGTTCTACACATAGATTCTCCCTT4760.28456305223764605No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG4680.279780479931131No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTCGACATGACTCTTCACTA4580.2738022645479872No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA4350.26005236916675634No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC4270.25526979686024126No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA4100.24510683070889677No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC3980.2379329722491242No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT3780.22597654148283655No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC3760.2247808984062078No Hit
CATAGACAGCTCACAGACTGCATACTACACTCAGACATGTTTCCTAGTTT3640.21760703994643518No Hit
CATAGATTAGTTCCTATTCTTGGTATGGCACTTCAGTTGACTATAAGAAA3540.21162882456329138No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA3490.20863971687171945No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA3420.20445496610351876No Hit
CATAGAACAATGTAATAAGCATCGGAGGACATGGATGAAGCTGGATCTAT3230.19309635687554552No Hit
CATAGAACAATGTAATAAGCATCGGAGGACTCTTCACTATGTCATCTTAC3140.18771596303071605No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT3050.18233556918588661No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGCCTGAGATTGCTGCTATCTATG3020.1805421045709435No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCTTGTGCTCATACAGAATTAG2940.17575953226442842No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG2900.1733682461111709No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG2880.17217260303454213No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC2770.16559656611308393No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTTGGGTGACAGAGTGAGTCTATG2260.1351076676590504No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG2230.13331420304410727No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC2060.12315123689276278No Hit
CATAGAGAAGAGAAGGCGACAATGGCAGAAAGAAGCCCCAAGGGCAGGTC2040.12195559381613401No Hit
CATAGAATGCAGGAGAATATACACAGCTTGGGTGACAGAGTGAGTCTATG2020.12075995073950524No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT1950.11657519997130457No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC1920.11478173535636141No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT1920.11478173535636141No Hit
CATAGAGCTATCAGTATACTCCCACCATGGTGGGTGCCTGATTGTTCTAT1920.11478173535636141No Hit
CATAGAGGGTGTTCTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA1890.11298827074141828No Hit
CATAGAGGGTGTTCTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA1890.11298827074141828No Hit
CATAGATCTGTGGCTCCCGATAAATGTATTTCCTTTAGAAAAGCAATTCT1780.10641223381996007No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT1710.10222748305175938No Hit
CATAGAGCTTCTTCCTGTTCATATTGGGGAACAGAACAACAACATCTATG1710.10222748305175938No Hit
CATAGAGCTTCTTCCTGTTCATATTGGGCAACAGAACAACAACATCTATG1690.10103183997513063No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)