FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804145

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804145
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences167274
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA158139.453351985365329No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT136518.160861819529634No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGCCATACCAAGAATAAGAA130747.815918791922235No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG110666.6154931429869555No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA77164.612790989633774No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA75734.5273025096548185No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT69364.146490189748556No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG67984.063990817461171No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT66063.94920908210481No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG62703.7483410452311774No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG58773.5133971806736253No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG39612.3679711132632684No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT37672.2519937348302785No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCAGTGTAGAAGCTTTGAGA26761.5997704365292873No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT24421.4598801965637218No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGCTGAAACTCTAAGGGTCT18581.1107524181881223No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC18421.1011872735750925No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC15190.9080909166995468No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA14720.8799933043987709No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC13650.8160263997991319No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT12590.7526573167378074No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT11710.7000490213661418No Hit
CATAGATGCCAAGAAGAGAAAAGCAGGAAAGTTGGAACCTATCAGTGTCT11270.673744873680309No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT10970.6558102275308775No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGGTAAACAAACTTCT10930.6534189413776199No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT9920.5930389660078673No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA9460.5655391752454058No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC8830.5278764183315996No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG8720.5213003814101415No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAACCTGTGTATATTCTCCT8080.48303980295802096No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG7600.45434436911893056No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT6500.38858399990434855No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG6020.3598885660652582No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA5020.30010641223381995No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG4730.2827695876227029No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGTCGACTATGGCTTAAT4600.2749979076246159No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA4320.2582589045518132No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC4200.25108504609204063No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT4010.2397264368640673No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC3820.22836782763609406No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGTATGCAGTCTGTGA3760.2247808984062078No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA3500.20923753841003384No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT3410.20385714456520437No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG3240.19369417841385989No Hit
CATAGATCCAGCTTCATCCATGTCCTCCGATGCTTATTACATTGTTCTAT3140.18771596303071605No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCCTCCGATGCTTATTACATT3080.1841290338008298No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCTTCTTCCTCCTCCTGTCTATG2990.17874863995600035No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGACCCCATATCTA2950.1763573538027428No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG2940.17575953226442842No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC2940.17575953226442842No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG2260.1351076676590504No Hit
CATAGACTCACTCTGTCACCCAAGCTGCTGCTCACTCTTTGGGTTCTATG2190.13092291689084976No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG2090.12494470150770592No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGATGATTCAAGTTCAAGT2060.12315123689276278No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT2060.12315123689276278No Hit
CATAGACTCACTCTGTCACCCAAGCTGTGTATATTCTCCTGCATTCTATG2020.12075995073950524No Hit
CATAGAACAATCAGGCACCCACCATGGTGGGAGTATACTGATAGCTCTAT1960.11717302150961895No Hit
CATAGACGGGAAGAGTAAGACCACCCAATTACCTTTCACGTAAGCAGATG1890.11298827074141828No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCGTGGTGTGCAAATTCT1870.1117926276647895No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC1790.10701005535827446No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC1790.10701005535827446No Hit
CATAGACACAACGTTTGAGACTGCCTGTGACACCGAAAAACACCCTCTAT1680.10043401843681625No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)