FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804146

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804146
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences171527
Sequences flagged as poor quality0
Sequence length150
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC105736.164044144653611No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA82924.834224349519318No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA77314.507162137739248No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC65133.7970698490616637No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA46712.7231864371206864No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA45012.624076675975211No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA44802.6118337054807697No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT41062.3937922309607234No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA39832.322083403778997No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG39342.293516472625301No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG26941.5705982148583022No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA23401.3642167122377236No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT23111.3473097529834954No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG20551.1980621126703084No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC17711.0324905116978669No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG16270.9485387140216992No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACATCGGCCGCACTGAAATT15820.9223037772478968No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA15350.8949028432841477No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG14100.8220280189124743No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA13800.8045380610632727No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTGAACAAGGGCATGGTCAA13230.7713071411497898No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC13190.7689751467698963No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT13070.7619791636302157No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA13020.7590641706553487No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC12570.7328292338815464No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT12230.7130072816524512No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT12210.7118412844625045No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGATGACTTATGGAATCTGA11330.6605374081048465No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCACACTGAGGTTCTTCAACACAG11290.6582054137249529No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG11130.6488774362053787No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC10900.6354684685209909No Hit
CATAGATCATGAATGACTCCCACTCTGCTAGGATGACTTATGGAATCTGA10890.6348854699260175No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAACAAGGGCATGGTCAAGTGT10790.6290554839762836No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT10740.6261404910014168No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC10150.5917435738979869No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA10030.5847475907583063No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGAATTAGAGCCAGTTCTGAGT9770.5695896272889982No Hit
CATAGACAGAACACCACACCCCTGTCACACTGACAATGGGCACACTTAAC9770.5695896272889982No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGAATTAGAGCCAGTTCTGA8710.5077917762218194No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT8700.5072087776268459No Hit
CATAGATTGCCTCATTGTGCCAGACAAGCACATTATTATTGGTTGGTTCT8650.504293784651979No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT8170.4763098520932565No Hit
CATAGATGCACCAGAAGCCACCTACCGTATTCCAACTCTATAGATTATGC7950.46348388300384197No Hit
CATAGATGCACCAGAAGCCACCTACCGTACAAGCACATTATTATTGGTTG7950.46348388300384197No Hit
CATAGAGACCCCCAAGTAGCCTAACTGAAATAGGAAAATGTCAGTGGGCC7880.45940289283902824No Hit
CATAGATGCACCAGAAGCCACCTACCGTATGGTGAAAAGTAGGGGACAGT7760.4524069096993476No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA7730.45065791391442744No Hit
CATAGATGCACCAGAAGCCACCTACCGTACACAAGCACATTATTATTGGT7730.45065791391442744No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG7340.4279209687104654No Hit
CATAGACAGAACACCACACCCCTGTCTCTTAGGAGTTCTGGCCCCTGTCT7130.4156779982160243No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT6980.4069330192914235No Hit
CATAGATGTCCCCATTCATCCTGCAACACACTGACGACAAGGTTTTCCGG6930.4040180263165566No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCCCTTCATTTTGCTGGAACTCTAT6790.3958560459869292No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAACAAGCACATTATTATTGG6780.3952730473919558No Hit
CATAGACCATGTAATACCATCGTGAGCAGCCTTCTCTGATACCATCCCTC6750.39352405160703563No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA6640.3871110670623284No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGAACAAGGGCATGGTCAAGTG6600.38477907268243483No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA6490.3783660881377276No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT6260.3649571204533397No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA5920.34513516822424456No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG5850.3410541780594309No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA5830.3398881808694841No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTTGTACAAACCAAACAATA5770.3363901892996438No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCTATGGACACAATGGGCAC5480.31948323004541557No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTATTTAAATGTTAGCTGTC5360.312487246905735No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5290.30840625674092126No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC5260.3066572609560011No Hit
CATAGAGCAGTGCAGCAGAAGATAGCACACTGAGGTTCTTCAACACAGCT5130.29907827922134705No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGCCAGCCTTCTCTGATACCATC5040.2938312918665866No Hit
CATAGAGACCCCCAAGTAGCCTAACTGACACTGATCTAGCTTCGGAATGT5010.29208229608166647No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTATCCATCAGAGCATCACC5000.29149929748669307No Hit
CATAGATGCACCAGAAGCCACCTACCGTACAATGGGCACACTTAACACCT4860.28333731715706567No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4780.2786733283972786No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA4730.2757583354224116No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG4700.27400933963749147No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG4510.26293236633299716No Hit
CATAGATGTCCCCATTCATCCTGCAACCTTCCAACTCTATAGATTATGCT4340.2530213902184496No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT4230.24660840567374231No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4230.24660840567374231No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCATAGAAGGGCAAGTGTATGG4220.24602540707876894No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC4220.24602540707876894No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT4170.24311041410390202No Hit
CATAGACAGAACACCACACCCCTGTCTATGGCTCTCTTCCGCCTTTATCC4130.24077841972400846No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTTGGGGGAAGAGAAACAGAAT4060.23669742955919476No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACTTAGGAGTTCTGGCCC3950.2302844450144875No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGAAAATGTCAGTGGGCCATC3900.22736945203962058No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCTACCC3900.22736945203962058No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCACAGCCCAGTTTTCCTTCTCTA3850.22445445906475367No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT3780.22037346889993994No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA3760.2192074717099932No Hit
CATAGATTTGGCACTCACATACACGCACATAGATCTGGGAGGAACAGGGA3750.2186244731150198No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCTGGCAAAAGGGTAAGAGTTCTA3680.21454348295020612No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3670.2139604843552327No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCACAGCCCAGTTTTCCTTCT3640.21221148857031255No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT3600.20987949419041899No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT3570.20813049840549885No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGACCCAACTATCCATCAGAGCAT3340.19472153072111095No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACACTGACTGAGGTTCTTCAA3310.19297253493619082No Hit
CATAGACAGTCCTGCCGTGTACATGTACGCTGACATCCCAACCACACGTC3300.19238953634121742No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC3250.18947454336635047No Hit
CATAGAATTGCCTACTTTGGGACCCATCTAGGATGACTTATGGAATCTGA3240.1888915447713771No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT3150.18364455741661664No Hit
CATAGACAGTCCTGCCGTGTACATGTGCCCTGTGATTGTCCTGGTCTATG3110.18131256303672308No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2920.17023558973222874No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA2780.16207360940260132No Hit
CATAGATTTGGCACTCACATACACGCACACTGACGACAATGGGCACACTT2760.16090761221265457No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2750.1603246136176812No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT2730.1591586164277344No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC2730.1591586164277344No Hit
CATAGAAAAGTCACCATGCAGCCCTGTTTTCCTTCTCTATGAGACCCACA2570.14983063890816023No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCTATTCTATGAGACAGGGC2560.14924764031318685No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT2460.143417654363453No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAACAAGGGCATGGTCAAGTGTCT2460.143417654363453No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG2430.14166865857853284No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT2360.1375876684137191No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG2320.13525567403382557No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA2300.13408967684387882No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTACACTGACGACAATGGGCAC2270.13234068105895863No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGACACTGACGACAAGGTTTTCCG2240.1305916852740385No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTTCAGAAAGTCTAGCCTTCTC2210.12884268948911834No Hit
CATAGAATTGCCTACTTTGGGACCCACCCGTAATCCCTCCCTTTTCTATG2200.12825969089414493No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAGAACAAGGGCATG2190.12767669229917156No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2170.1265106951092248No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2160.1259276965142514No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2110.12301270353938447No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2090.1218467063494377No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTCGTCACTTAGGAGTTCTGGC2040.11893171337457077No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAAAAGTCACTCAAATATAGACC1980.11543372180473045No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCTGGTGGTGCTGGAACTAGTTC1940.1131017274248369No Hit
CATAGACCCCCATGCAACCACATCTATGTACAATGGGCACACTTAACACC1920.11193573023489015No Hit
CATAGAACCCTGCTTCCTAAATCAACACACTGATCTAGCTTCGGAATGTT1860.10843773866504981No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCTACCG1850.10785474007007642No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGACATGGTTCTACACATAGATCC1850.10785474007007642No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCCCTTTTGCCAAGATTGTAGG1820.10610574428515628No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC1800.10493974709520949No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG1770.10319075131028933No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1770.10319075131028933No Hit
CATAGACCATGTAATACCATCGTGAGCAGAATTTTGGGGGAAGAGAAACA1760.10260775271531594No Hit
CATAGACAGTCCTGCCGTGTACATGTGAGGTTCTTCAACACAGCTATTCT1760.10260775271531594No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCACACTGACGACATGGTTCTACA1740.10144175552536919No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGTCACTCAAATATAGACC1720.1002757583354224No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)