FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804147

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804147
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences171527
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG106236.193194074402281No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT82904.833058352329371No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT76904.483259195345339No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG63753.7166160429553363No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT45602.6584735930786407No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT45232.6369026450646254No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT44332.584432771517021No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT40702.3728042815416814No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG39062.277192511966046No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT38932.2696135302313922No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG26971.5723472106432224No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT25241.4714884537128265No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT23341.3607187206678832No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG20311.184070146390947No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG17571.0243285313682393No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG15750.918222787083083No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC15600.9094778081584823No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTTGCAGGATGAATGGGGAC15270.8902388545243606No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT13440.7835501116442309No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA13250.7724731383397366No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13140.7660601537950293No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT13090.7631451608201625No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT13070.7619791636302157No Hit
CATAGACACTTGACCATGCCCTTGTTCACACTGCTCACGATGGTATTACA12990.7573151748704285No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12960.7555661790855084No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG12080.7042623027278505No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC11950.6966833209931964No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTACGGTAGGTGGCTTCTGGT11290.6582054137249529No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTGTGCATTCTTTCTCCAGACC11140.6494604348003521No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG10900.6354684685209909No Hit
CATAGACACTTGACCATGCCCTTGTTCTGCTTTTACAAACTCAAGTGATT10900.6354684685209909No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTAGCAGAGTGGGAGTCATTCA10830.6313874783561771No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT10760.6273064881913635No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC10130.5905775767080401No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT9760.5690066286940249No Hit
CATAGACTCAGAACTGGCTCTAATTCCTGGATCTCAGAGTTAGCTTGCCT9590.5590956525794772No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCAGTGTGACAGGGGTGTGGTGTT9090.529945722830808No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT8860.5165367551464202No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT8590.5007957930821386No Hit
CATAGACTCAGAACTGGCTCTAATTCCTTACGGTAGGTGGCTTCTGGTGC8500.4955488057273782No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT8110.4728118605234161No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACGGTAGGTGGCTTCTGGTG8040.4687308703586025No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATACGGTAGGTGGCTTCTG7990.46581587738373553No Hit
CATAGAACTGTCCCCTACTTTTCACCATACGGTAGGTGGCTTCTGGTGCA7790.45415590548426776No Hit
CATAGATGGCCCACTGACATTTTCCTATTTCAGTTAGGCTACTTGGGGGT7770.452989908294321No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGTACGGTAGGTGGCTTCTGG7700.44890891812950734No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT7690.44832591953453393No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA7500.4372489462300396No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7220.4209249855707847No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATTCTTTCTCCAGACCTTCATCT6980.4069330192914235No Hit
CATAGACAGGGGCCAGAACTCCTAAGAGACAGGGGTGTGGTGTTCTGTCT6980.4069330192914235No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTGTTGCAGGATGAA6890.401686031936663No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGCTCACGATGGTATTACATGGTC6810.39702204317687595No Hit
CATAGAGTTCCAGCAAAATGAAGGGGCTATCTTCTGCTGCACTGCTCTAT6800.3964390445819026No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTACGGTTGCAGGATGAATGG6690.3900260600371953No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6610.38536207127740824No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTAGGTGGCTTCTGGTGCA6580.3836130754924881No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG6440.3754510951628607No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT6270.3655401190483131No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT5910.3445521696292712No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC5820.33930518227451073No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA5700.3323091991348301No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAACACTGCTCACGATGGTATTA5610.3270622117800696No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA5430.31656823707054865No Hit
CATAGAAACTCTGAGACAGCTAACATTTAAATACACTGCTCACGATGGTA5340.3113212497157882No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGTCCATAGATCTGCTCACGATGG5320.3101552525258414No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGTTAGGCTACTTGG5230.30490826517108094No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTAGCAGCTCCTCTTCTCTT5110.2979122820314003No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTGTGCTATCTTCTGCTGCACT5080.29616328624648014No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGGCATGTCTCTCCCTCTCTCACA4990.29091629889171966No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTCAGTTAGGCTACTTGG4900.2856693115369592No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4820.2810053227771721No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACGGTAGGTGGCTTCTGGTGCAT4810.2804223241821987No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG4740.27634133401738503No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC4730.2757583354224116No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCTCTTCACCTCCCAGATCTATG4460.2600173733581302No Hit
CATAGAACTGACCATACACTTGCCCTTCTATGGTCTAGGATGAGATAATT4240.24719140426871572No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT4200.24485940988882215No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAGGTTGCAGGATGAATGGG4180.2436934126988754No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT4170.24311041410390202No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4140.24136141831898184No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAAGCAGCAAACAATTTCAGAAAGT4070.23728042815416817No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATAGACAGGGGTGTGGTGTTCT4070.23728042815416817No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC3960.2308674436094609No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTAGCAGCTCCTCTTCTCTT3960.2308674436094609No Hit
CATAGATGGCCCACTGACATTTTCCTACGGTAGGTGGCTTCTGGTGCATC3940.22970144641951412No Hit
CATAGAGAAGGAAAACTGGGCTGTGGACACTTGAAAGCTCCCTGGATCTA3900.22736945203962058No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT3750.2186244731150198No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3720.21687547733009963No Hit
CATAGAACTCTTACCCTTTTGCCAGGACACTTGAAAGCTCCCTGGATCTA3700.21570948014015284No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3650.21279448716528593No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGTGCGTGTATGTGAGTG3620.21104549138036577No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTACGGTAGGTGGCTTCTGGTGCAT3570.20813049840549885No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT3510.20463250683565853No Hit
CATAGAAGGGGTGATGCTCTGATGGATAGTTGGGTCCCACCTAAACTCCT3350.19530452931608436No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTCAGTGTGGGTAGAATCTTGA3350.19530452931608436No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTAGATGGGTCCCAAAGTAGGC3240.1888915447713771No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC3230.18830854617640372No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTACATGTACACGGCAGGACTGTC3210.18714254898645694No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT3110.18131256303672308No Hit
CATAGACCAGGACAATCACAGGGCACATGTACACGGCAGGACTGTCTATG3100.1807295644417497No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2970.17315058270709568No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2770.16149061080762797No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC2710.15799261923778762No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC2690.15682662204784087No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT2620.15274563188302717No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGCGTGTATGTGAGT2620.15274563188302717No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTCTCATAGAGAAGGAAAACAGGG2540.14808164312324007No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC2520.1469156459332933No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT2490.14516665014837313No Hit
CATAGAACTGACCATACACTTGCCCTGTCTCATAGAATAGCTGGGTAGAA2460.143417654363453No Hit
CATAGACACTTGACCATGCCCTTGTTGACACTTGAAAGCTCCCTGGATCT2450.1428346557684796No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT2420.14108565998355943No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG2380.1387536656036659No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2290.1335066782489054No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTCCCACCTAAACTC2250.13117468386901188No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAAGAAAGAAAACCC2240.1305916852740385No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA2230.1300086866790651No Hit
CATAGAGGGATGGTATCAGAGAAGGCTAGACTTTCTGAAAATGTTTGCTA2210.12884268948911834No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTCCCAAAGTAGGCAATTCTATG2210.12884268948911834No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2200.12825969089414493No Hit
CATAGACACTTGACCATGCCCTTGTTCTGGTCTCATAGACACTTGAAAGC2180.12709369370419815No Hit
CATAGAAGGAGCTGGGAGTTGAGATAATTGCCCTTCTATGTGTAGAACCA2160.1259276965142514No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2120.12359570213435786No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT2100.12242970494441108No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2050.11951471196954416No Hit
CATAGAACTAGTTCCAGCACCACCAGACTGGGTCCCAAAGTAGGCAATTC2000.11659971899467723No Hit
CATAGACAGGGGCCAGAACTCCTAAGTGACGAAATGTTTGCTATTACGAG1990.11601672039970384No Hit
CATAGAACTGACCATACACTTGCCCTGGATCTATGTGTAGAACCATGTCG1960.11426772461478368No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTTTTCTTGTCCCCTATTACT1960.11426772461478368No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA1880.1096037358549966No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACATAGATGTGGTTGCATGGGGG1870.1090207372600232No Hit
CATAGATCTACTCCTACAATCTTGGCAAAAGGGGTCTAGGATGAGATAAT1820.10610574428515628No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTGTTGATTTAGGAAGCA1810.10552274569018288No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAATTCTGCTCACGATGGTATTACA1770.10319075131028933No Hit
CATAGAATAGCTGTGTTGAAGAACCTCACATGTACACGGCAGGACTGTCT1750.10202475412034258No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)