FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804148

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804148
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences123856
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1560712.600923653274771No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA52684.253326443611936No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA45513.674428368427852No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG43033.4741958403307063No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA40413.262659863066787No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG22391.807744477457693No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT19411.5671424880506393No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG18871.5235434698359385No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG18651.5057809068595789No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA14401.1626404857253585No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA13501.0899754553675236No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT13491.0891680661413254No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA12421.0027774189381218No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC12230.9874370236403566No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT11730.9470675623304482No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC11380.9188089394135124No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA11110.8970094303061621No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC10800.8719803642940189No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATCTACAAGGACACTCATCTAT10090.8146557292339491No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA9890.7985079447099858No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA9830.7936636093527969No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT9280.7492572019118977No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT9170.7403759204237179No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG8690.701621237566206No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA8520.6878956207208371No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT8240.6652887223872884No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA8160.6588296085777032No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTAGGCTGAGAAAGGAGGATCA7460.6023123627438316No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC7210.5821276320888774No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA6280.507040434052448No Hit
CATAGAGGATCCCCTGACATTTTGGTTGTGTAGCCTGTTCACTCTGATGG6240.5038108771476553No Hit
CATAGATGCTTCTGATATGTTGCCGTATGGTGGAGGGCTTTGCTGTTTCT6120.49412220643327737No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT6110.49331481720707915No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA6110.49331481720707915No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT6010.4852409249450976No Hit
CATAGATGCTTCTGATATGTTGCCGTAGTAGATGCTCAGATCTCAAAAGG5740.46344141583774706No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA5730.46263402661154884No Hit
CATAGATGCTTCTGATATGTTGCCGTCCAGTGAACTCAAGGGGGTCTATG5670.4577896912543599No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAGAGGGTGGGGAAAGAGAGCACTC4760.38431727167032687No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT4760.38431727167032687No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGAAATGTACAGGTGCAAATTG4630.3738212117297507No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA4580.3697842655987599No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGAGAAAGGAGGATCACTCTAT4530.365747319467769No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGGCACAGGGTAATGGAGGAGT4390.3544438703009947No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA4370.3528290918485984No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA4360.35202170262240023No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA4210.33991086422942773No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACAGGTGCAAATTGTCAGTGT4140.33425913964604054No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTAGGG4050.32699263661025707No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGACATGTGTGAGAGGGAAGGAC4000.32295569047926626No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACGGACTACAAGTACCCAC3950.3189187443482754No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT3930.31730396589587906No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATAGACCAAAGCTAGAAA3840.3100374628600956No Hit
CATAGAAGGAGCTGGACTGGATGGACTCACATGTGTGAGAGGGAAGGACT3840.3100374628600956No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3800.30680790595530294No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTACCGAGCAAACTAACACAGA3660.2955044567885286No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG3640.2938896783361323No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3590.28985273220514146No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGATAGATTTACTGACATGGGC3580.2890453429789433No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3450.2785492830383671No Hit
CATAGAAGGAGCTGGACTGGATGGACTCAGGGTAATGGAGGAGTATGGGA3330.26886061232398917No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGGTGGTGGAGGGCTTTGCTGTTT3240.2615941092882057No Hit
CATAGACCTGTGTGTGAGGCATTGTTAGACCTGTGGTGGAGGGCTTTGCT3230.2607867200620075No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT3130.2527128278000258No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACTGACGACATGGTTCTACACA3130.2527128278000258No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATGGGCTGAGAAAGGAG3110.25109804934762947No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3110.25109804934762947No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATGGTGGAGGGCTTTGCTGT3100.2502906601214313No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT3090.2494832708952332No Hit
CATAGATGCTTCTGATATGTTGCCGTACATGTGTGAGAGGGAAGGACTCT3000.24221676785944968No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC2970.2397946001808552No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2950.23817982172845883No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACATGTGTGAGAGGGAAGGACT2900.23414287559746805No Hit
CATAGATCATGGGACTTCAGCATGGCCACACTCTCAGTTGTGTGTGTGGT2880.2325280971450717No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCTACACATAGAACAGCT2820.2276837617878827No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTGGTCATTCTTCTCTGGGGGCT2640.2131507557163157No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACACATAGAACAGCTA2630.21234336649011754No Hit
CATAGACTCTGTTTTGCTACCTGGGGTACGGAGATAGAGAGGTTGGTTCT2600.20992119881152305No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCACATGTGTGA2570.20749903113292859No Hit
CATAGACCAAAGCTAGAAACTCCCATCTATGAGACCAAGTCTCTGCTACC2560.20669164190673042No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA2550.20588425268053223No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2510.20265469577573958No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGGCAAACTAACAC2500.2018473065495414No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTAATGGAGGAGTATGGGATCT2490.20103991732334323No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACAACTGGCATCTGGTGATCTAT2460.19861774964474874No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT2440.19700297119235238No Hit
CATAGATGATCCATCTACCTCTGCTTCAACACGGACTACAAGTACCCACC2440.19700297119235238No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGGAGACAGCCGCTCACCTC2370.19135124660896527No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTCATAGGGTGGGGAAAGAGAGCA2340.18892907893037075No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTTTGGTGGAGGGCTTTGCTGTTT2340.18892907893037075No Hit
CATAGATGTGCCACATACCTTTCCCAGGTTCTACACATAGAACAGCTAAA2310.18650691125177624No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA2280.18408474357318177No Hit
CATAGATCACCCAGCCCATATTGCACCATAGACCTGTGGTGGAGGGCTTT2230.18004779744219093No Hit
CATAGACCACCGTGCCCAGATAAGTTACACTGACGACATGTGTGAGAGGG2210.1784330189897946No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC2200.17762562976359644No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAGAACATTAGCTTAGTTAA2190.17681824053739828No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGATCACCAGATGCCTCTTGTA2170.17520346208500193No Hit
CATAGATGATCCATCTACCTCTGCTTCATCTACCTCTAACTTCATAGCAC2140.17278129440640744No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTAGCAAACTAA2120.1711665159540111No Hit
CATAGACTCTGTTTTGCTACCTGGGGATAGACATGTGTGAGAGGGAAGGA2110.17035912672781295No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGACACTTTGGACTCTGCCTCTAT2100.16955173750161479No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTACCGATCTATGTGTAGACCA2090.16874434827541662No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGTGTGAGA2080.16793695904921843No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA2050.16551479137062394No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGAGACCAAAGCTAGAAACTC2040.1647074021444258No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT2010.1622852344658313No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTCGGCTGAGAAAGGAGGA2000.16147784523963313No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA2000.16147784523963313No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT1930.15582612065624596No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT1890.15259656375145328No Hit
CATAGACAGCTGGGGTGGGAGGTTAGCTTGAGCCTTTAGCCAATTGTTTA1880.15178917452525514No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACGGACTACAAGTACCCACCAC1820.14694483916806614No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAAGCTAGAA1810.14613744994186798No Hit
CATAGATCACCCAGCCCATATTGCACACACGGACTACAAGTACCCACCAC1800.1453300607156698No Hit
CATAGATGCTTCTGATATGTTGCCGTGATGCTCAGATCTCAAAAGGCTTC1790.14452267148947165No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACTGGAGACAGCCGCTC1770.14290789303707532No Hit
CATAGATGCTTCTGATATGTTGCCGTCAGTGTGGCTGAGAAAGGAGGATC1750.14129311458467897No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA1720.13887094690608448No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATTAGGACACTTTGG1720.13887094690608448No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGCCTCGAGGCAGAGGACA1680.13564139000129183No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATGGCAAACTAACACAGAA1670.13483400077509367No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACGGACTACAAGTACCCAC1640.13241183309649915No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTACTCCCTCATTATCCCTG1610.12998966541790466No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCACTGACGACATGTGTGAG1520.12272316238212118No Hit
CATAGATGCTTCTGATATGTTGCCGTATGTTGCCTTTCCTCAGTTCTTTT1510.121915773155923No Hit
CATAGAGAACAGCCCTGAGAGAATGGACGACATGGTTCTACACATAGAGA1500.12110838392972484No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTATGTGTAGAACC1500.12110838392972484No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1480.1194936054773285No Hit
CATAGACCACCGTGCCCAGATAAGTTCACATAGAACAGCTAAAAATCTTG1470.11868621625113034No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT1460.11787882702493219No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACATAGAGAACAGCTAAAAATC1440.11626404857253585No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACATGTGTGAGAGGGAAGGACTCT1440.11626404857253585No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1430.11545665934633768No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAAGCTCTGCCTCCTGGGTTCACAC1430.11545665934633768No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1430.11545665934633768No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGGTTCTAC1420.11464927012013952No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTAGAACATTAGCTTAGTTAATT1420.11464927012013952No Hit
CATAGACTCTGTTTTGCTACCTGGGGACTACAAGTACCCACCACCTCTAT1390.11222710244154502No Hit
CATGTGTGAGAGGGAAGGACTCTATGAGACCAAGTCTCTGCTACCGTATA1360.10980493476295053No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG1360.10980493476295053No Hit
CATAGATGCCTCAAAGAGCTGAAGACACAGCACACTCTTGGAGAGGAGGG1360.10980493476295053No Hit
CATAGATGTGGTCTCAGTGCCCTATGTCAGATGAGTAGGTTGCAAAAATT1340.10819015631055419No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACATAGAGAACAGCTAAAAATCT1340.10819015631055419No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA1330.10738276708435603No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACCTCTAACTTCATAGCACAT1320.10657537785815785No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTACCGATCTATGTGTAGAACC1280.10334582095336521No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACTGACGACATGTGT1270.10253843172716703No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC1250.1009236532747707No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGTTACACATAGAACAGC1240.10011626404857253No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1240.10011626404857253No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)