FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804150

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804150
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99496
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1106411.120045026935756No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA52335.259507919916379No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA47424.766020744552544No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG42064.227305620326445No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT32543.2704832355069553No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA31463.1619361582375167No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA28822.8965988582455573No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG25842.5970893302243305No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT22242.235265739326204No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC18591.8684168207767144No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA18441.8533408378226262No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC18401.8493205757015359No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA17571.765900136688912No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC15971.6050896518453004No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA13231.329701696550615No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG11891.1950229154940901No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA10921.0975315590576507No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG9800.9849642196671223No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9650.9698882367130337No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA9520.9568223848194902No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT9420.9467717295167645No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA7530.7568143442952481No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT7460.74977888558334No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG6720.6754040363431696No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6490.6522875291469004No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT6300.6331912840717215No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT6250.6281659564203586No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTTCTACACATAGACCAAAGCT6010.6040443836938169No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT5520.5547961727104607No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA5410.5437404518774623No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAACTTAGCAACCTGTACATTT5170.5196188791509206No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACTGACGACATGTGTGA5050.5075580927876497No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACTGCCTCTTGTAGAAG4840.4864517166519257No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG4780.48042132347029026No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGAACAGCTAAAAATCTTGGAGC4630.4653453405162017No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG4560.4583098818042936No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT4440.44624909544102276No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4440.44624909544102276No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCAGG4380.4402187022593873No Hit
CATAGACCTGTGTGTGAGGCATTGTTATAGACATGTGTGAGAGGGAAGGA4360.43820857119884216No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG4320.43418830907775186No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG4270.429162981426389No Hit
CATAGATGCTTCTGATATGTTGCCGTACAGGTGCAAATTGTCAGTGTGTC4150.4171021950631181No Hit
CATAGATGCTTCTGATATGTTGCCGTACCTCTAACTTCATAGCACATCAT4000.4020262121090295No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3850.38695022915494093No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCACAACTGGCATCTGGTGATCT3810.3829299670338506No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA3540.35579319771649115No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG3470.3487577390045831No Hit
CATAGATGTGCCACATACCTTTCCCAACACTGACGACATGTGTGAGAGGG3330.33468682158076707No Hit
CATAGACCTGTGTGTGAGGCATTGTTAGATCTCCCTCATTATCCCTGTGC3170.31860577309640586No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG3090.3105652488542253No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGGTGGGGAAAGAGAGCACTCT3070.3085551177936801No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG3050.306544986733135No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3030.30453485567258987No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT2980.299509528021227No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACACGGACTACAA2920.29347913483959154No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA2890.2904639382487738No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAGGTGGTGGAGGGCTTTGC2740.27538795529468524No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTAGGCTGAGAAAGGAGGATCA2560.2572967757497789No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2390.24021066173514513No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA2290.2301600064324194No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG2290.2301600064324194No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT2280.2291549409021468No Hit
CATAGAAGGAGCTGGACTGGATGGACTCGGAGAGGAGGGGGCAGAATATC2150.21608908900860335No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG2030.20402830264533248No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1850.18593712310042615No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTGAGAAAGGAGG1830.183926992039881No Hit
CATAGATGTGCCACATACCTTTCCCAGGGTAATGGAGGAGTATGGGATCT1830.183926992039881No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTGGCTGAGAAAGGAGGATCACT1810.18191686097933585No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT1790.1799067299187907No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGAGGCTGAGAAAGGAGGATCACT1780.17890166438851812No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC1780.17890166438851812No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1750.17588646779770042No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGAGAGGAGGGGGCAGAATATCTATG1730.17387633673715527No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1730.17387633673715527No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT1700.17086114014633755No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA1680.1688510090857924No Hit
CATAGATGTGCCACATACCTTTCCCAGACTCTATGTGAGGGTAATGGAGG1660.16684087802524725No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC1640.1648307469647021No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACACTTTGGACTCTGCCTCTATG1590.15980541931333922No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA1560.15679022272252152No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1520.15276996060143122No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1430.14372437082897804No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT1380.13869904317761517No Hit
CATAGACCCTCCTATCCCTTTTCCCCATAGACATGTGTGAGAGGGAAGGA1360.13668891211707002No Hit
CATAGACCACCGTGCCCAGATAAGTTACACTGACGACATGGTTCTACACA1340.1346787810565249No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1260.1266382568143443No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG1230.12362306022352658No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACTCTGTCGTGGGGAGAGGAGGGG1220.12261799469325399No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA1200.12060786363270884No Hit
CATAGAGAACAGCCCTGAGAGAATGGGTTCTACACATAGAGAACAGCTAA1190.11960279810243628No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCAAGGGGGTCTATGAGACTCC1170.11759266704189113No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGTAACAGAGAAGTCAAGAGGAAA1160.11658760151161855No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGCCTCTATGAGACCAAGTCTC1140.1145774704510734No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1140.1145774704510734No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC1110.11156227386025569No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT1090.10955214279971054No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1060.10653694620889281No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT1060.10653694620889281No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCAAGGGTGGGGAAAGAGAGCA1060.10653694620889281No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGTCATTCTTCTCTGG1010.10151161855752994No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTATGTCTGCTGAG1000.10050655302725738No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)