FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804153

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804153
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82194
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3433741.77555539333772No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA39974.86288536876171No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG29973.6462515512081177No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG23962.9150546268584083No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT17482.12667591308368No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC12101.4721269192398472No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG11251.3687130447477918No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG11031.3419471007616126No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG8461.0292722096503395No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT5560.6764484025597975No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT4740.576684429520403No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT4410.5365355135411344No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA3780.45988758303525806No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG3380.41122223033311434No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT2950.35890697617830986No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT2550.31024162347616613No Hit
CATAGAGGCTGGGTGACTTGGTGAATGAGAGAAAACTACCCCAGGCTCTA2540.3090249896586125No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC2490.30294182057084457No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT2410.29320875003041585No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTACCAGTGTAGCAGA2400.29199211621286225No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGGTAGCAAAGCTGCT2400.29199211621286225No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA2250.2737426089495584No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCTTGGCCTCAGTTTCCCC2210.26887607367934396No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACAACACAGGATCCAGGTGTC2200.2676594398617904No Hit
CATAGAGGGGAGACACTGGCTATAAGAAATACCTGGGCGACCTCTCTATG2120.2579263693213617No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA2080.2530598340511473No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2040.2481932987809329No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2040.2481932987809329No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTTGGCCTCAGTTTCCCCTCC1890.22994379151762903No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA1850.22507725624741465No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG1850.22507725624741465No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGGCCTCAGTTTCCCCTCCTTCT1750.21291091807187873No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC1740.21169428425432515No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA1670.20317784753144996No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG1650.2007445798963428No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1620.197094678443682No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1620.197094678443682No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1600.19466141080857485No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG1560.18979487553836047No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTACGGTAGAGAGACTTGGCCTCAG1540.18736160790325326No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT1530.1861449740856997No Hit
CATAGATGTGAGCACTACTGATAATCCCTACGGTAGACACTGGGGGCACA1530.1861449740856997No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1510.1837117064505925No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC1490.1812784388154853No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1490.1812784388154853No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG1480.18006180499793173No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG1460.17762853736282452No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA1440.17519526972771735No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA1380.1678954668223958No Hit
CATAGACTGGCGGTGATTGCTTTCCTACACTGATGTGGCATGGAGAAGGG1380.1678954668223958No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1370.1666788330048422No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTTACGGTAGCAGAGACTCA1370.1666788330048422No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG1370.1666788330048422No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1360.1654621991872886No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGCCTCAGTTTCC1350.164245565369735No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG1350.164245565369735No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACCCTTTCTGGGTAGCTGCGACC1330.16181229773462785No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG1330.16181229773462785No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1310.15937903009952065No Hit
CATAGATGATGTGAAAAGGACCCATGGTCATAGATGATGTGGCATGGAGA1310.15937903009952065No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG1270.15451249482930626No Hit
CATAGATGACCTGTTAATCTGCCCCCTTCCAGGGCCCCACTGCTATCCTG1230.1496459595590919No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA1220.1484293257415383No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTGATTGGCCTCAGTTTCCCCT1190.14477942428887752No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC1120.13626298756600239No Hit
CATAGATGTGAGCACTACTGATAATCCCTTTCCAAGAGTTCCCTGTGCTG1110.1350463537484488No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC1100.1338297199308952No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTTGGCCTCAGTTTCCC1040.12652991702557365No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCCCTTGCCCTGTGGCCCTGGCT1040.12652991702557365No Hit
CATAGACTGGCGGTGATTGCTTTCCTAGAGACTCAGTCTGCATAGCCACA1020.12409664939046645No Hit
CATAGATGACCTGTTAATCTGCCCCCGTTTGAGGTAAAACTATTAGCGAG1020.12409664939046645No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGAAGTCCCATGGCCATGC1020.12409664939046645No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCTTGGCCTCAGTTTCCCCTC990.12044674793780569No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA980.11923011412025208No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT980.11923011412025208No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTCTTTCTGGGTAGCT950.1155802126675913No Hit
CATAGACTGGCGGTGATTGCTTTCCTGACTTGGCCTCAGTTTCCCCTCCT940.11436357885003773No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG930.11314694503248413No Hit
CATAGACTTACTGCCCTCACTCCGTCACCCAGGCTGGAGTCCAGTAGCGT920.11193031121493054No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG910.11071367739737693No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA900.10949704357982334No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGAGACCAAGCCATCAATTT900.10949704357982334No Hit
CATAGATTAGGGGTGACGGACTAGCCTTGGCCTCAGTTTCCCCTCCTTCT890.10828040976226976No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGCTATAAGAAGACAC870.10584714212716258No Hit
CATAGATACGATCATAAGGGTGGGGCTGGACATGGTGGCTTATGCTGTAA850.10341387449205539No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)