FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804154

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804154
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108354
Sequences flagged as poor quality0
Sequence length150
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1910917.63571257175554No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG58655.412813555567861No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG43904.051534784133488No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA33633.103715598870369No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT28222.6044262325341014No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG22032.0331505989626595No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC16761.546781844694243No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA16711.542167340384296No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC14811.366816176606309No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA14071.298521512819093No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG13641.2588367757535486No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG12691.171161193864555No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA11951.102866530077339No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA9450.8721413145799878No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA8300.7660077154512063No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA5650.5214389870240138No Hit
CATAGAGAGGTCGCCCAGGTATTTCTACGGGGGCAGATTAACAGGTCATC5600.5168244827140668No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC5540.5112870775421304No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT5460.5039038706462152No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT5380.49652066375029996No Hit
CATAGATCAACAATGGATGAGCAAAAGGGATTATCAGTAGTGCTCACATC5230.4826771508204588No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG5080.46883363789061777No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC5050.4660649353046496No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT4620.42638019823910517No Hit
CATAGAAGATCCCATAGCAGCTTTGCTAATGAGGGATTATCAGTAGTGCT4530.41807409048120053No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG4500.41530538789523225No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGACACTGACGACATGGTTCT4440.40976798272329584No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTGACGACATGGTTCTA4150.38300385772560314No Hit
CATAGACCATTTGCCGCGTTCTGAAGGGTAGCATGTTGAGATGAATAATT3990.3682374439337726No Hit
CATAGACCATTTGCCGCGTTCTGAAGGCAGATCATGAGGTCAGGTCTATG3720.3433191206600587No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG3620.33409011204016464No Hit
CATAGATCACCTACACAGACAGCTTTCCTACGGGGGCAGATTAACAGGTC3440.3174778965243554No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAAATATGCT3310.3054801853184931No Hit
CATAGACCATTTGCCGCGTTCTGAAGTACGGGGGCAGATTAACAGGTCAT3180.29348247411263084No Hit
CATAGAACACAGATCTGCTTGGAGGTAGCATAGAGTAACCTCCTCCAGTC3130.2888679698026838No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC3070.28333056463074735No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA3030.27963896118278975No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG3000.2768702585968215No Hit
CATAGAGGGGCATGCTGGATAAATCTATAGCATGTTGAGATGAATAATTG3000.2768702585968215No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA2960.2731786551488639No Hit
CATAGATGTGCCTCTCCAACATTCATGAAAGGGGGCAGATTAACAGGTCA2870.2648725473909593No Hit
CNTAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG2810.2593351422190228No Hit
CATAGAACACAGATCTGCTTGGAGGTACGGGGGCAGATTAACAGGTCATC2660.24549162928918178No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGCCATGTCTTCTGTGTTTG2560.2362626206692877No Hit
CATAGACCCTTCTCCATGCCACATCATCAGCATGTTGAGATGAATAATTG2530.2334939180833195No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCTACGGGGGCAGATTAACAGG2520.23257101722133008No Hit
CATAGACCATTTGCCGCGTTCTGAAGGAGGGAAGGAAGGGCAAACTCTAT2500.23072521549735128No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGCTAGTCCGTCACCCCTAATCT2500.23072521549735128No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA2490.22980231463536185No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGTACGGGGGCAGATTAACAG2490.22980231463536185No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTAGGTAGAGGAGTTTCAAACATCT2470.22795651291138305No Hit
CATAGATCAACAATGGATGAGCAAAAGGCAGATCATGAGGTCAGGTCTAT2460.22703361204939365No Hit
CNTAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG2410.22241910773944662No Hit
CATAGAAGATCCCATAGCAGCTTTGCACACTGACGACATGGTTCTACACA2360.2178046034294996No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCAAAACCACTTGAACATTGCC2340.2159588017055208No Hit
CATAGACCATTTGCCGCGTTCTGAAGGACACTGACGACATGGTTCTACAC2300.21226719825756316No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATACACTGACGACATGGTTCTACA2240.20672979308562675No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC2230.20580689222363732No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTACGGGGGCAGATTAACAGGTCAT2210.20396109049965855No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA2210.20396109049965855No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA2150.1984236853277221No Hit
CATAGATGTGCCTCTCCAACATTCATCATTTCCCCTCTCTCTGAATAACT2140.19750078446573266No Hit
CATAGAGGGGCATGCTGGATAAATCTACATGGAGGGAAGGAAGGGCAAAC2110.19473208187976446No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC2060.19011757756981745No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTATAGCCAGTGTCTCCCCTCTATG1990.18365727153589162No Hit
CATAGAGAGGTCGCCCAGGTATTTCTACACTGACGACATGGTTCTACACA1970.18181146981191282No Hit
CATAGAACTTTGTGCCCCCAGTGTCTGAATAAAGGAAAGCAATCACCGCC1960.18088856894992342No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGGGTCCTTTTCACATCATCTATG1890.17442826291599756No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGACAGCCGCTCACCTCTA1880.17350536205400816No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTCTTAGGTAGAGGAG1830.16889085774406115No Hit
CATAGAGGGGCATGCTGGATAAATCTTAACTTCAGGGTGCTCCTCTATGA1790.16519925429610352No Hit
CATAGACTCAAGCAATCCTCCCACCTTACGGGGGCAGATTAACAGGTCAT1780.1642763534341141No Hit
CATAGAGGGGCATGCTGGATAAATCTATGGCTCTCTCCAGAACCCACCAT1770.1633534525721247No Hit
CATAGATCACCTACACAGACAGCTTTCCCACACTCATGCAAAGCTGGTCT1720.1587389482621777No Hit
CATAGAGGTCGCAGCTACCCAGAAAGGCAGATCATGAGGTCAGGTCTATG1710.1578160474001883No Hit
CATAGATCACCCAGGTAATCACTAGGTATTAAACTTAGTACCCATTAGTT1690.15597024567620946No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGTCTATGAGAGGCAGATCATGAG1610.14858703878029422No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA1600.14766413791830482No Hit
CATAGACACCTGGATCCTGTGTTGTCTATGAGTGCAGCTATATTGGAGGA1580.14581833619432602No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCCCACACTCATGCAAAGCTGG1580.14581833619432602No Hit
CATAGAGCTTCTGATCACTTTCGCCCTACGGGGGCAGATTAACAGGTCAT1570.1448954353323366No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACAGCATGTTGAGA1570.1448954353323366No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA1560.1439725344703472No Hit
CATAGACCATTTGCCGCGTTCTGAAGCTAATAGTTTTTCCAAATATAAGA1540.1421267327463684No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTATTCTTATAGCCAGTGTC1530.14120383188437896No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAAGCATGTT1530.14120383188437896No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCACACTGACGACATGGTTCT1510.13935803016040016No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT1500.13843512929841076No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC1490.13751222843642136No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACAGTCCTGGCA1480.13658932757443196No Hit
CATAGACACCTGGATCCTGTGTTGTCTGTGTAAAACCACTTGAACATTGC1400.1292061206785167No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCACACTGACGACATGGTTCTACACA1390.1282832198165273No Hit
CATAGACACCTGGATCCTGTGTTGTCTGTGTAGCATGTTGAGATGAATAA1350.12459161636856969No Hit
CATAGATGTGGCTATGCAGACTGAGTACGGGGGCAGATTAACAGGTCATC1340.12366871550658029No Hit
CNTAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT1310.12090001292061206No Hit
CATAGACTCAAGCAATCCTCCCACCTACGGTAGCATGTTGAGATGAATAA1310.12090001292061206No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCAGTGGGGGGCAGATTAACAGGTC1300.11997711205862266No Hit
CATAGAGTCTCGCTAATAGTTTTTCCAAATATAAGATCCCATCATCTCTA1290.11905421119663326No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTACCTTTCAG1250.11536260774867564No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAGGGATTAT1250.11536260774867564No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1250.11536260774867564No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCAGATC1250.11536260774867564No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA1220.11259390516270742No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC1220.11259390516270742No Hit
CATAGATGTGGCTATGCAGACTGAGTAGACTGAGCAGAGTTGGGTGTGTC1220.11259390516270742No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCAAGAATGAGGAGAGTACTACTTTC1210.11167100430071802No Hit
CATAGACTCAAGCAATCCTCCCACCTCTGACGACATGGTTCTACACATAG1190.1098252025767392No Hit
CATAGACCATTTGCCGCGTTCTGAAGACCCTGAAGTTTGAGAGCAAGTTC1180.1089023017147498No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC1170.1079794008527604No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGATTATCAGTAGTGCTCACAT1150.10613359912878158No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG1150.10613359912878158No Hit
CATAGACTCAAGCAATCCTCCCACCTTTCAGCATCTCTTTGGCTCTATGA1130.10428779740480278No Hit
CATAGAGGGGCATGCTGGATAAATCTATAGAGTTTTTCCAAATATAAGAT1120.10336489654281338No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA1120.10336489654281338No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGACATGGTTCTACACA1110.10244199568082396No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT1110.10244199568082396No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTACCCTGAAG1100.10151909481883456No Hit
CATAGATCATGGGACTTCAGCATGTTGAGATGAATAATTGAGACTCTATG1090.10059619395684516No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCTCAGCATGTTGAGATGAATA1090.10059619395684516No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)