FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804157

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804157
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21569
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG17898.29431128007789No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG13296.161620844730864No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT11095.141638462608373No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT8814.0845658120450645No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT8403.8944781862858733No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC7383.4215772636654456No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG7263.365941861004219No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT4872.257870091334786No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCCGGATTCAAGCAATTCTTCTAT4782.2161435393388658No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG4762.2068709722286615No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG4141.9194213918123233No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA3421.5856089758449627No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTTGGCCTCAGTTTCCC2911.3491585145347489No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA2231.0338912327877974No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGTTTGAGGTAA2150.9968009643469795No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA2130.9875283972367751No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGCTATAAGAT1870.8669850248041171No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC1760.8159859056979925No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGGCCTCAGTTTCCCCTCCTTCT1660.7696230701469702No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT1640.7603505030367658No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG1610.7464416523714591No Hit
CATAGACCAAACACAGAAGACATGGCACTTCAGAACGCGGCAAATGGTCT1540.7139876674857435No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT1480.68616996615513No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG1470.6815336826000279No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC1410.6537159812694144No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG1380.6398071306041078No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGGTGGGAGGATTGCTTGAGTC1380.6398071306041078No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC1360.6305345634939034No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC1360.6305345634939034No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA1340.6212619963836988No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA1320.6119894292734944No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT1300.6027168621632899No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG1270.5888080114979832No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGAGAGAAAACTACCCCAGG1150.5331726088367564No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA1090.5053549075061431No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA1040.4821734897306319No Hit
CATAGACCTGACCTCATGATCTGCCTTTTGCTCATCCATTGTTGATCTAT1000.463628355510223No Hit
CATAGACCTGACCTCATGATCTGCCTTTCTGGGTAGCTGCGACCTCTATG1000.463628355510223No Hit
CATAGATGGTGGGTTCTGGAGAGAGCCGCTAGGTGGGAGGATTGCTTGAG950.44044693773471183No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTACTTGGCCTCAGTTTCCCCT950.44044693773471183No Hit
CATAGATACGATCATAAGGGTGGGGCCTGTGTTCTTTGCATGATCTATGT890.4126292364040985No Hit
CATAGATGATGTGAAAAGGACCCATGGGGAAGTAGGGAATGATTACAAGT810.3755389679632806No Hit
CATAGAGGCTGGGTGACTTGGTGAATCTTGATGAATGTTGGAGAGGCACA790.36626640085307616No Hit
CATAGACCAGCTTTGCATGAGTGTGGGGAAGTAGGGAATGATTACAAGTT760.3523575501877695No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCTCCTCTATGAGGTGGGAGGA750.3477212666326673No Hit
CATAGATGTGAGCACTACTGATAATCCCTGCACACTACAATTACAGTACT750.3477212666326673No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTGTAGCAGAGACTTGGTCTCA730.3384486995224628No Hit
CATAGAGGCTGGGTGACTTGGTGAATTCTCATAGAGGCTGGGTGACCTAG710.3291761324122583No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGGTGGGAGGATTGCTTGAGTCTA700.3245398488571561No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGGGCGAAAG700.3245398488571561No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG690.3199035653020539No Hit
CATAGACACCTTGTATATGCCAGGACTAGACACTGGGGGCACAAAGTTCT670.3106309981918494No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG650.30135843108164495No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG650.30135843108164495No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA610.282813296861236No Hit
CATAGAGGGGAGACACTGGCTATAAGAACAGAGACTTGGTCTCATAGAGG560.2596318790857249No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATGTGGCATGGAGAAGGGTCT560.2596318790857249No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA550.2549955955306227No Hit
CATAGATGTGAGCACTACTGATAATCCCTTTTGCTCATCCATTGTTGATC510.23645046131021372No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGCATGATGTTTTAAAATGAG510.23645046131021372No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACACTGGGGGCACAAAGTT500.2318141777551115No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG450.20863275997960035No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTATGCTGAAGTCCCATGAT430.19936019286939588No Hit
CATAGACCTGACCTCATGATCGGCCTGTGTTCTTTGCATGATCTATGTGT420.19472390931429367No Hit
CATAGACCAGCTTTGCATGAGTGTGGATGAATGTTGGAGAGGCACATCTA390.18081505864898698No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGTAGCAAAGCTGCTATGG380.17617877509388474No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG380.17617877509388474No Hit
CATAGATACGATCATAAGGGTGGGGCACTTGGCCTCAGTTTCCCCTCCTT370.1715424915387825No Hit
CATAGATACGATCATAAGGGTGGGGCATGGAGAAGGGTCTATGTGTAGAA310.1437247902081691No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACACCAGTGTAGCAGACCATCTT300.1390885066530669No Hit
CATAGACCTGACCTCATGATCTGCCTCCAAGCAGATCTGTGTTCTATGTG300.1390885066530669No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA290.13445222309796467No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA280.12981593954286244No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG280.12981593954286244No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCAGTCTGCATAGCCACATCT270.1251796559877602No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGTAGCAGGACTTGGCCTC270.1251796559877602No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCACCAGTGTAGCAGACCATCT260.12054337243265797No Hit
CATAGATGATGTGAAAAGGACCCATGGCAAACACTCAAAACAGCCCTCTA260.12054337243265797No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACCGTAAGGTGGGAGGAT250.11590708887755576No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA240.11127080532245352No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA230.10663452176735129No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAGGATTGCTTGAGTCTATGTGTA230.10663452176735129No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGAGTCTATGTGTAGAACCA220.10199823821224906No Hit
CATAGATACGATCATAAGGGTGGGGCCTTGGCCTCAGTTTCCCCTCCTTC220.10199823821224906No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)