FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804164

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804164
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84838
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3638542.887621113180415No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG43525.129776750984229No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT33423.9392724958155547No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG18452.1747330205804003No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC13161.5511916829722532No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT12131.4297838232867348No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA12031.4179966524434806No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG10781.270657016902803No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGCCATCACAGTTCATTG7230.8522124519672788No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT6660.7850255781607298No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT6530.7697022560644995No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAG6220.7331620264504114No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC5000.5893585421627101No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT4980.5870011079940592No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT4760.5610693321389001No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA4700.5539970296329475No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT4640.546924727126995No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA4630.5457460100426695No Hit
CATAGACACATGTAGGATGGGGTGGCATTTCCACCTTCACTCTCTCTCTC4560.5374949904523916No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4500.5304226879464391No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG4070.47973785332044605No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTATAAAAAATATGCAAAATTA3990.47030811664584266No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTATATTT3990.47030811664584266No Hit
CATAGACACATGTAGGATGGGGTGGCTTGGCTGGCTTGGCTGGCTGGGTG3920.46205709705556475No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT3860.45498479454961216No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAT3740.44084018953770715No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACCAAGTTCCATGT3360.3960489403333412No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATTAACGGGGCAT3280.3866192036587378No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT3030.35715127655060236No Hit
CATAGAGCTATCTGGCAAAAACCCATCTTTACAAAATTAAAAAAATTAGC2740.32296848110516513No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2620.30882387609326006No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC2450.28878568565972795No Hit
CATAGATGAAAGACAAGCAGGGAAGCCTTTAGGAGGTGTGACACCTGAGC2370.2793559489851246No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG2280.2687474952261958No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2020.23810085103373488No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1950.22984983144345694No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1760.20745420684127394No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1720.2027393385039723No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG1620.1909521676607181No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1620.1909521676607181No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1600.18859473349206723No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT1600.18859473349206723No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1510.17798627973313846No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1450.17091397722718593No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC1320.1555906551309555No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1300.15323322096230463No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1290.1520545038779792No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1280.1508757867936538No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1260.14851835262500293No Hit
CATAGACACATGTAGGATGGGGTGGCTGGAGGCCCCACCTGGGAGGTCAG1210.14262476720337586No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1210.14262476720337586No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1190.14026733303472502No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1170.13790989886607416No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1170.13790989886607416No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1170.13790989886607416No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGCTGTGCTGGGTAGTGGTAGTCTA1150.13555246469742332No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGGCATTGCTCTTGACATCTCTATG1130.1331950305287725No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC1130.1331950305287725No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1120.13201631344444706No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1110.13083759636012166No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1060.12494401093849454No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG1050.12376529385416914No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1050.12376529385416914No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC1010.11905042551686744No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT950.11197812301091492No Hit
CATAGAGATAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT950.11197812301091492No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGACGCAGGTCAAGGT930.10962068884226407No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG920.10844197175793867No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC910.10726325467361322No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTAAAAAAATTACAAAAATTAG890.1049058205049624No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG890.1049058205049624No Hit
CATAGACACATGTAGGATGGGGTGGCTGCCATGATTGTAAGTTTCTTGAG890.1049058205049624No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC870.10254838633631155No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)