FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804165

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804165
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84838
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3672543.28838492185106No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG43575.135670336405855No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA33573.9569532520804356No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG22382.6379688347202905No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG17702.086329239255994No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT13021.534689643791697No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT12451.4675027699851482No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT7130.8404252811240246No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT6700.7897404464980315No Hit
CATAGACCATCCTCCCACCTTGACCTCTGGAGTAGCTGGGACTACAGGCC6310.7437704802093402No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG6260.7378768947877131No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC6160.7260897239444589No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAATGCAGACAGACAAGAAG5110.6023244300902897No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC5020.591715976331361No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA4890.5763926542351304No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA4800.5657842004762017No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC4620.544567292958344No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG4540.5351375562837408No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG4240.49977604375397816No Hit
CATAGACCATCCTCCCACCTTGACCTCTCGAGTAGCTGGGACTGCAGGCC3920.46205709705556475No Hit
CATAGAAGGTGATAATCATGACAGCCAAGTGGCCAGACAGCCAAGGCAGC3860.45498479454961216No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT3850.4538060774652868No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGGGATAG3800.4479124920436597No Hit
CATAGACCATCCTCCCACCTTGACCTCCAAAGTAGCTGGGACTACAGGTG3700.4361253212004055No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG3580.4219807161885004No Hit
CATAGAACATCGCACACACATGGAACTTGGTACTCCTATGTAATGTCTTA3430.4042999599236191No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGGGAGCTGGGACCACAGGTG3200.37718946698413447No Hit
CATAGACCATCCTCCCACCTTGACCTCATCCTCCCATCTCAAGTCTCACT3080.36304486197222946No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTTGCTGGGACCACAGGTG2680.3158961785992126No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG2480.29232183691270425No Hit
CATAGAGGTGAGCGGCTGTCTCCAGACGCAAAGCCCTCCCTGCTTCCCAA2460.2899644027440534No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG2310.272283646479172No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG2000.23574341686508404No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1870.22042009476885357No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1870.22042009476885357No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1720.2027393385039723No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1690.199203187250996No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1680.1980244701666706No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1680.1980244701666706No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1640.1933096018293689No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG1630.1921308847450435No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC1620.1909521676607181No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1600.18859473349206723No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1450.17091397722718593No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG1390.1638416747212334No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1340.1579480892996063No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1300.15323322096230463No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1280.1508757867936538No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1270.14969706970932836No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1260.14851835262500293No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA1250.14733963554067753No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1220.14380348428770126No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG1200.14144605011905043No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAAAGCCTTCAGGTCA1200.14144605011905043No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG1180.13908861595039956No Hit
CATAGACTACCACTACCCAGCACAGCACAGCTGCTTTGCCAATTCATGGC1160.13673118178174876No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1150.13555246469742332No Hit
CATAGACTACCACTACCCAGCACAGCCACCCAGTACAGGAGCACCCTCTA1120.13201631344444706No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCAGTACAGGAGCACCCTCTATG1060.12494401093849454No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG1020.12022914260119287No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA1020.12022914260119287No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGAATTACAGGCA990.11669299134821659No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCAGCATTTTAACACAGCATTGA980.11551427426389119No Hit
CATAGACCATCCTCCCACCTTGACCTGCGTCATGAGCCACCATGCCCGGC960.11315684009524034No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTGGGATTACAGGCG950.11197812301091492No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA920.10844197175793867No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGCCACCCCATCCTACATGTG900.10608453758928782No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA870.10254838633631155No Hit
CATAGAGCCTGGCATTTGAGGTAAGGAACACAGGTGGATTTGGAAGCTGC850.10019095216766072No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)