FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804172

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804172
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95855
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3489336.401856971467325No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG54685.704449428824788No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT25062.614365447811799No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG19502.034322674873507No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT17201.7943769234781703No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT12001.2518908768452348No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA11611.211204423347765No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC10791.1256585467633407No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT9941.0369829429868032No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG9731.0150748526420112No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGCTGTCATGATTATCACCTTCTA8990.9378749152365553No Hit
CATAGAGCAGACAAACTTGCAAAAGACTACACTGCCATCACAGTTCATTG8460.8825830681758906No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA8310.8669344322153253No Hit
CATAGACACATGTAGGATGGGGTGGCCCCTGTCCCGGGTGCCACGAGGTC8030.8377236450889364No Hit
CATAGAGGTGTCCTTTCCCCACTTTATACACTGTCTCTGACTGTGTTAAT7800.8137290699494028No Hit
CATAGAGCTATCTGGCAAAAACCCATCCCCAGACAGGATGCGCAGATGGT7300.7615669500808513No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACATGGAGGATGATCAATGC6380.6655886495227167No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT6350.6624589223306036No Hit
CATAGATCCACAAAGACCAAGAGTGTCCCATAGAATTTCCGTTTGCTGCA5700.5946481665014867No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT5660.5904751969120026No Hit
CATAGACACATGTAGGATGGGGTGGCAGTTCCCCTGTCGCTCTCTCTGTC5520.5758698033488081No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4400.45902665484325283No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG4210.43920504929320325No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT4010.4183402013457827No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT3950.4120807469615565No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCATCACA3850.4016483229878462No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT3450.35991862709300504No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA3420.35678889990089196No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGGTCAAGGTGGGAGGATGGTC3250.3390537791455845No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT3150.3286213551718742No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC3000.3129727192113087No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2950.3077565072244536No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG2890.30149705284022743No Hit
CATAGAGGGTGCTCCTGTACTGGGTGATGAGGGTATAAGGTCTATGTCAT2680.2795889624954358No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT2600.2712430233164676No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACCGTATCTCTGACTGTGTT2530.2639403265348704No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGGAGACAGCCGCTCACC2480.25872411454801525No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG2440.2545511449585311No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTAGGTCAAGGTGGGAGGATGGT2330.24307547858744982No Hit
CATAGATCATGGGACTTCAGCATGGCTCACTGGAACCTCAACCTCTCGGG2260.2357727818058526No Hit
CATAGAAAGTCTGGACCAAGTGCCTCAGTGTTGATGAGGGTATAAGGTCT2250.23472953940848157No Hit
CATAGAGGGTGCTCCTGTACTGGGTGCACTGGTTCCATGTGTGTGCGATG2170.22638360022951332No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2080.21699441865317406No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC2060.21490793385843202No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA2040.21282144906368994No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAG1950.2034322674873507No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAAATACAAAAATTA1930.20134578269260864No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT1920.2003025402952376No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG1780.18569714673204318No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1650.1721349955662198No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1610.16796202597673568No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1550.16170257159250953No Hit
CATAGAAAGTCTGGACCAAGTGCCTCAGGCTCCCTGCCCCCGAGTGCCCC1540.16065932919513848No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1490.15544311720828335No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA1440.1502269052214282No Hit
CATAGAAGCATGGAAGACAAACAGCACACTGACGACATGGTTATGTAGAC1430.14918366282405715No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1430.14918366282405715No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC1420.14814042042668615No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTACG1400.14605393563194408No Hit
CATAGATCCACAAAGACCAAGAGTGTCGTCAGGTTCCATGTGTGTGCGAT1400.14605393563194408No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1380.14396745083720203No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC1340.1397944812477179No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1310.13666475405560483No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1310.13666475405560483No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1300.1356215116582338No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1280.13353502686349175No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA1270.1324917844661207No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1270.1324917844661207No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1220.12727557247926555No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG1220.12727557247926555No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTTCATTCGCTCCCCTGCCACCAGG1200.1251890876845235No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1190.12414584528715247No Hit
CATAGATCCACAAAGACCAAGAGTGTCTATGTGTAGAATGCCATGATTGT1190.12414584528715247No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1180.12310260288978143No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTATATGGGATCAGACT1150.11997287569766836No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG1140.11892963330029734No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1130.1178863909029263No Hit
CATAGACACATGTAGGATGGGGTGGTTATGTAGACAGGGATTGATCTCTA1130.1178863909029263No Hit
CATAGACACATGTAGGATGGGGTGGCTAAGAGCCTTACCTCAAATGCCAG1080.11267017891607115No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG1080.11267017891607115No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1080.11267017891607115No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1060.1105836941213291No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCCCGGCCTCAGCTGGCTCTAGG1060.1105836941213291No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT1010.10536748213447394No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG980.10223775494236084No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG970.10119451254498983No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)