FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804186

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804186
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159756
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA149749.3730438919352No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG84775.306216980895866No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC80805.057713012343824No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG61733.864017626880994No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG49783.1160019029019255No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG42542.6628107864493353No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA42042.6315130574125543No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT39112.448108365257017No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA38802.4287037732542127No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT35442.2183830341270436No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC33242.080673026365207No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC24021.5035429029269636No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA23921.4972833571196074No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC22281.3946268058789655No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG21881.3695886226495404No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA21321.3345351661283458No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA20571.287588572573174No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA19721.2343824332106461No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT19221.203084704173865No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA19191.2012068404316583No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT18571.1623976564260496No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT16211.014672375372443No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA15190.9508250081374096No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC14690.9195272791006284No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG14210.8894814592253186No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG13520.8462905931545608No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT11940.7473897693983325No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT11650.7292370865569995No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT10590.6628859009990236No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG9660.6046721249906106No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG9350.5852675329878064No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC8450.5289316207216005No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA8440.5283056661408648No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG8250.5164125291068881No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG6900.43190866070757905No Hit
CATAGACCAGCAGACACTCCCATCATTTGCCCAAGGGGTAAGGCGTACTG6510.4074964320588898No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG6340.39685520418638426No Hit
CATAGAAAAAACAGTTGGCCAGGCATTGCTTCTTGTGGTAACTGGTCTAT5840.3655574751496032No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA5720.3580460201807757No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGGAGACAGCCGCTCACC5250.32862615488620145No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT5220.3267482911439946No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA5180.3242444728210521No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG5150.32236660907884523No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT5050.316107063271489No Hit
CATAGACCAGCAGACACTCCCATCATTCAGCATTGCTTCTTGTGGTAACT4900.3067177445604547No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTTGCTGAAGTGATGGGCT4870.3048398808182478No Hit
CATAGACACAACAGAGAGAACGGGCTGCCCTCTCTGCTGTTCCTTCTATG4640.29044292546132855No Hit
CATAGACGTGACTAAAAGCATGTTGGTCCTGGTGCATTACAGAGAGGAGA4570.28606124339617917No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC4390.27479406094293796No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT4170.2610230601667543No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGACGATCATTGTTCACTG4160.2603971055860187No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA4160.2603971055860187No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT4120.2578932872630762No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT4070.2547635143593981No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGACATGGTTCTACACAT3750.2347329677758582No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTCTCAAACTGCT3740.2341070131951226No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC3720.2328551040336513No Hit
CATAGACCCAAGACCCCAGCCTTTACGATCATTGTTCACTGCAGCCTCTA3630.2272215128070307No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTATGGCTAC3620.2265955582262951No Hit
CATAGACCAGCAGACACTCCCATCATTCAGGACATGCCAGGAATCAATGT3610.22596960364555949No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGACGCTATACCACACTAC3360.21032073912716892No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT3350.2096947845464333No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG3300.2065650116427552No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT3290.2059390570620196No Hit
CATAGACCAGCAGACACTCCCATCATTCAAGGGGTAAGGCGTACTGGTCT3270.20468714790054832No Hit
CATAGACCTCCGACAGTTTTTATGCACCGCCACGCTGTCCTTCTCTGAAT3260.2040611933198127No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAGTTCTGCTTGTGGTGAGTTGAC3210.20093142041613463No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA3210.20093142041613463No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT3140.19654973835098524No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGACGACATGGTTCTA3090.19341996544730714No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGCCCTCTCTGCTGTTCC3080.19279401086657152No Hit
CATAGAAAAAACAGTTGGCCAGGCATCCAAGGGGTAAGGCGTACTGGTCT3010.18841232880142217No Hit
CATAGACACAACAGAGAGAACGGGCTAGATCTATGCTGAAGTGATGGGCT2970.18590851047847967No Hit
CATAGATGAGGACACCATAAAGACAACAAGGGGTAAGGCGTACTGGTCTA2930.1834046921555372No Hit
CATAGACGGATTATTCTCTCCATGGTCTGAGGAGAATTCAAGCTGCTCTA2910.18215278299406595No Hit
CATAGATCACGTAGAAACTGGAGAGGCACTGACGCTATACCACACTACAC2880.1802749192518591No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC2880.1802749192518591No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGACATGCCAGGAATCAA2840.1777711009289166No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC2730.17088560054082474No Hit
CATAGAGTGCCTGTTTCCTCATTCGTATGGTTCTACAAAGGATTCTGGGC2650.1658779638949398No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA2530.15836650892611231No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGCTAATCTGAAATCTTCGTGTTC2500.15648864518390546No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGACATGGTTCTACAAA2460.15398482686096296No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGTCATTGTCGCTGTC2330.14584741731139989No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2310.14459550814992864No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCAAGGGGTAAGGCGTACT2280.14271764440772178No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAAAAGGCTAATCTGAAATCTTC2250.14083978066551492No Hit
CATAGAAGGACAAAGACATTTAGGACCCCTGCAGTCTTTGGAGGAATCTA2230.13958787150404367No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT2210.13833596234257242No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA2200.13771000776183678No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGTAGCAGCATAATTTCCCATG2180.13645809860036556No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG2170.13583214401962992No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGTTCTACAAAGGATTCTGGGC2120.13270237111595182No Hit
CATAGATGGCCAAGATACGAGCACATACACTGGCTCAGGTATGTCTTTAT2050.1283206890508025No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACACACTGACGACAAGGGG2050.1283206890508025No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACAAATGAGAAACCTGGA2050.1283206890508025No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT2030.12706877988933124No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2000.12519091614712435No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACACACTGACGCTATACCA1970.1233130524049175No Hit
CATAGATGGCCAAGATACGAGCACATAGAGATCCCACCATTTGCCATCTA1960.12268709782418188No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGACGACATGGTTCTACACAT1950.12206114324344625No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACGCTATACCACACTACA1950.12206114324344625No Hit
CATAGATCAAGGAAAACACCAGCCCAACACTGACGCTATACCACACTACA1950.12206114324344625No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGACGCTATACCACAC1930.120809234081975No Hit
CATAGATCATGGGACTTCAGCATGGCCTTGGTCTACCAGTTATTAGTTGA1930.120809234081975No Hit
CATAGATCAAGGAAAACACCAGCCCAAACACTGACGCTATACCACACTAC1890.11830541575903253No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGGCTCAGGTATGTCTTTA1840.11517564285535441No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTGTTTCCCCACTCAAATACCA1840.11517564285535441No Hit
CATAGACTCATTGCACTTTCCACAACTGTATGGTGGAAGGGTAAGAGAGG1820.11392373369388316No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1820.11392373369388316No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC1770.11079396079020506No Hit
CATAGACCTCCGACAGTTTTTATGCACCAACATTGCTTCTTGTGGTAACT1740.1089160970479982No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGAACCATGTCACGCTATACCACAC1730.10829014246726257No Hit
CATAGACTCATTGCACTTTCCACAACTGTCACGCTATACCACACTACACA1630.10203059665990635No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)