FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804187

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804187
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159756
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT148179.274769022759708No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG83565.230476476626856No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG79604.98259846265555No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG59243.7081549362778237No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG49513.0991011292220634No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA41562.6014672375372445No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG41372.5895741005032678No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT38582.414932772478029No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC38202.3911464984100754No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT34432.1551616214727463No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC32662.044367660682541No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC23631.4791306742782744No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA23391.4641077643406195No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC22331.3977565787826436No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG21481.3445504394201158No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA21211.327649665740254No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT20091.2575427526978644No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT19511.2212373870151982No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT18881.1818022484288542No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT18731.1724129297178196No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT18131.1348556548736823No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT15620.9777410551090413No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT14880.9314204161346052No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT14810.9270387340694559No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC14090.8819700042564912No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG14050.8794661859335486No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG12990.8131150003755727No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT11740.73487067778362No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG10460.6547484914494605No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT10430.6528706277072536No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG9500.5946568516988407No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA9190.5752522596960364No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG8630.5401988031748416No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT8280.518290392849095No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG8240.5157865745261524No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG7960.498259846265555No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC6850.42877888780390094No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG6310.39497734044417737No Hit
CATAGACCAGTACGCCTTACCCCTTGGGCAAATGATGGGAGTGTCTGCTG6200.38809184005608555No Hit
CATAGACCAGTTACCACAAGAAGCAATGCCTGGCCAACTGTTTTTTCTAT5790.3624277022459251No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG5570.34865670146974137No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT5550.3474047923082701No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTTGTTACAAAAATTGGGAAGCGG5320.33300783695135083No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG5030.3148551541100178No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT5010.3136032449485465No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG4930.30859560830266153No Hit
CATAGATCTAGCCCATCACTTCAGCAACACTGACCAACATGCTTTTAGTC4930.30859560830266153No Hit
CATAGACCAGTTACCACAAGAAGCAATGCTGAATGATGGGAGTGTCTGCT4670.2923207892035354No Hit
CATAGAAGGAACAGCAGAGAGGGCAGCCCGTTCTCTCTGTTGTGTCTATG4530.28355742507323667No Hit
CATAGATCTCCTCTCTGTAATGCACCAGGACCAACATGCTTTTAGTCACG4480.28042765216955856No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTTACAAAAATTGGGA4100.256641378101605No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGCATGCCTTTGATAAAACATC4100.256641378101605No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT4100.256641378101605No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCCTGGGAGAAGAAA4090.2560154235208693No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC3990.2497558777135131No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTAGATCTC3860.24161846816395No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG3810.23848869526027192No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGATGGGAGTGTCTG3580.2240917399033526No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCCCAGCAGTCTGAGAAAAGATGC3560.22283983074188138No Hit
CATAGAACATTGATTCCTGGCATGTCCTGAATGATGGGAGTGTCTGCTGG3470.2172062395152608No Hit
CATAGAGGCTGCAGTGAACAATGATCGTAAAGGCTGGGGTCTTGGGTCTA3460.21658028493452514No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG3330.20844287538496203No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT3320.20781692080422642No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTTACAAAAATTGGGAA3260.2040611933198127No Hit
CATAGACCAGTACGCCTTACCCCTTGAATGATGGGAGTGTCTGCTGGTCT3240.20280928415834146No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG3220.20155737499687024No Hit
CATAGAAGTATTCACACTGGGGCCCAGCCACGGTCAGTTCCCACAGCCAC3170.19842760209319213No Hit
CATAGATTCAGAGAAGGACAGCGTGGCGGTGCATAAAAACTGTCGGAGGT3120.19529782918951402No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCCTGGGAGAAGAAATGTTG3050.19091614712436464No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTGTTAATATAGAAGAGACACA2990.18716041963995092No Hit
CATAGACCAGTACGCCTTACCCCTTGGATGCCTGGCCAACTGTTTTTTCT2960.18528255589774406No Hit
CATAGATCTAGCCCATCACTTCAGCATAGATCTAGCCCGTTCTCTCTGTT2940.18403064673627284No Hit
CATAGACCAGTACGCCTTACCCCTTGTTGTCTTTATGGTGTCCTCATCTA2900.18152682841333034No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGCCTCTCCAGTTTCTACGT2830.177145146348181No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA2790.1746413280252385No Hit
CATAGAACATTGATTCCTGGCATGTCCACACTGTCATTGTGGGTTTTAAC2770.17338941886376724No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATACGAATGAGGAAACAGGC2700.16900773679861789No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGCTGGTGTTTTCCTT2500.15648864518390546No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC2450.15335887228022735No Hit
CATAGAACACGAAGATTTCAGATTAGCCTAACACGCACAAAGGCACTGTC2450.15335887228022735No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTATGTGCT2400.15022909937654924No Hit
CATAGATGGGACAGCGACAATGACAGTGTGTCTGAGAAAAGATGCAGTAC2310.14459550814992864No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2280.14271764440772178No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTCCTAAATGTCTTTGTCCTTCTA2210.13833596234257242No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTCAGACCCAGGCTACACATCTAT2210.13833596234257242No Hit
CATAGATGACATGGGAAATTATGCTGCTACATGAGCATGCCTTTGATAAA2200.13771000776183678No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACATGAGCATGCCTTTGATAAAA2200.13771000776183678No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA2170.13583214401962992No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGTCATTGTGGGTTTTAACT2160.13520618943889431No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA2140.13395428027742307No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG2130.13332832569668746No Hit
CATAGAACACGAAGATTTCAGATTAGCCTTTTAGCCTCTCCAGTTTCTAC2090.13082450737374496No Hit
CATAGACCAGTACGCCTTACCCCTTGTCGTCAGTGTGTTTACCTCTCAGT2080.13019855279300935No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTATGTGCTCGTATCTTG1970.1233130524049175No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT1970.1233130524049175No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTACACTGTCATTGTGGGTTTTAA1950.12206114324344625No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGCTCGTATCTTGGCCATCTA1940.12143518866271064No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTTATAGAAAACAAGGA1910.11955732492050376No Hit
CATAGAGCTAATAAAGACATACCTGAGCCACATAGATGCCTGGCCAACTG1900.11893137033976815No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAAGGCCATGCTGAAGTC1870.1170535065975613No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGGGCTGGTGTTTTCCT1860.11642755201682566No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTACACTGTCATTGTGGGTTTTAAC1820.11392373369388316No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTTGGGCTGGTGTTTTCC1800.11267182453241194No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTGGGAGAAGAAATGTTGG1800.11267182453241194No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTCTGAGAAAAGATGCA1800.11267182453241194No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG1800.11267182453241194No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA1800.11267182453241194No Hit
CATAGACCCTCTCTTACCCTTCCACCATACAGTTGTGGAAAGTGCAATGA1760.11016800620946944No Hit
CATAGACCAGTTACCACAAGAAGCAATGTTGGTGCATAAAAACTGTCGGA1720.10766418788652696No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)