FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804192

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804192
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences560530
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG7720313.773214636147932No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA493308.800599432679785No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC320665.720657235116764No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC216613.864378356198598No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT180953.228194744259897No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA163632.919201470037286No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC153252.734019588603643No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG142492.5420584090057625No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA121202.162239309225198No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG104121.8575276970010526No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA86951.551210461527483No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA84581.5089290492926337No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG82671.4748541558881774No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC80951.4441689115658396No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT66561.1874475942411646No Hit
CATAGAACAAGGCCAGAATTACCCTGTGCTCATACAGAATTAGATCTAGC58991.0523968387062246No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG56591.009580218721567No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC54680.9755053253171105No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT45490.8115533512925268No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT44110.7869337948013487No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTATGCTGGGTGAGAAATGA43630.7783704708044172No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG41440.7393003050684175No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG38600.6886339714199062No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGGAGACAGCCGCTCA38320.6836386990883627No Hit
CATAGACCCTTAGAGTTTCAGCCTCCACACTGACGACATGGTTCTACACA32530.5803436033753768No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTTCTACACA32080.5723154871282536No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT30670.5471607228872675No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC29070.5186163095641625No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGTGCTCATACAGAAT28200.5030952848197242No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC26810.4782973257452768No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT26510.47294524824719464No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT25890.4618842880844915No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC25350.4522505485879435No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC23230.41442920093482954No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA22600.403189838188857No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG22210.39623213744135016No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACCAACTTCAGTTGACTA21560.3846359695288388No Hit
CATAGACCCTTAGAGTTTCAGCCTCCACATAGACTCTTCACTATGTCATC21450.38267354111287527No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC21270.379462294614026No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT20650.36840133445132284No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACTCTTCACTATGTCATC20600.36750932153497584No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACGTCCGCAGTTGTTCTTTCC20390.3637628672863183No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC18810.33557525912975217No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG17980.32076784471839154No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC17440.31113410522184365No Hit
CATAGAACAAGGCCAGAATTACCCTGACACTGACGACATGACTCTTCACT14790.2638574206554511No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT14630.2610029793231406No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGGTGGGTG14180.25297486307601735No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA13500.24084348741369774No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG12230.2181863593384832No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT11700.20873102242520472No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT11360.20266533459404493No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG11000.19624284159634633No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT10910.19463721834692166No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCCAT10650.1899987511819171No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTGGGTGCCTG10500.18732271243287602No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT10490.18714430984960664No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT10230.18250584268460207No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGAAAGGGACATGGATGAAGCT8930.15931350685957932No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTAGAACCCAAAGAGTGAGCCCTTG8900.15877829910977112No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG8630.15396142936149715No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG8500.15164219577899488No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC8370.1493229621964926No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT8320.14843094928014558No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG8160.14557650794783508No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATAGAACCCAAAGAGTGAGCCCT8110.14468449503148806No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCCATGAGACC7840.13986762528321411No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAAGAGTGAGCCCTTGTCCCTTTCT7830.1396892226999447No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGAACCCAAAGAGTGAGCCCTTGTC7740.13808359945052004No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA7680.1370131839509036No Hit
CATAGATTCTCCCTTGTGCTCATACAGAATTAGATCTAGCTCTATGAGAC7680.1370131839509036No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG7630.13612117103455657No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGGGACATGGATGAAGCTGG7140.1273794444543557No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT6770.12077854887338768No Hit
CATAGATCATGGGACTTCAGCATGGCGGGTGCCTGATTGTTCTATGAGAC6580.11738889979126899No Hit
CATAGATCATGGGACTTCAGCATGGCAGACATCTAGGCAGTCTCAAACGT6490.11578327654184431No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA6430.1147128610422279No Hit
CATAGACCCTTAGAGTTTCAGCCTCCACACTGACGACATGGTTCTGCACA6340.11310723779280323No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTCAGACATGTTTCCTAG6090.1086471732110681No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTTCAAAATAGTACCCTTGACTC6080.10846877062779868No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)