FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences169901
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG93815.521450727188186No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT80384.730990400291935No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT72424.262482269086115No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG58033.4155184489791117No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT51293.018816840395289No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT47352.7869170870094937No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT46542.7392422646129218No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT45752.692744598324907No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT40702.3955126809141793No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG32891.9358332205225395No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT32311.9016956933743767No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT28321.666853049717188No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT20711.218945150411122No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG19751.1624416572003697No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT19431.1436071594634523No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT19341.1383099569749442No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG18951.1153554128580763No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT18831.108292476206732No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC18441.0853379320898642No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC17591.0353087974761774No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG17471.0282458608248333No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT16970.9988169581108999No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC14350.8446095078898888No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT14120.8310722126414795No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG13390.7881060146791365No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG13380.7875174366248581No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT12790.7527913314224166No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT12760.7510255972595805No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT12600.7416083483911219No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA11700.6886363235060418No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG11220.6603845769006657No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT10840.6380186108380763No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT10760.633309986403847No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC10630.6256584716982243No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC10600.6238927375353882No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA10460.6156526447754869No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG10070.5926981006586188No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT9980.5874008981701109No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG9950.5856351640072749No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC9670.5691549784874721No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC9110.5361946074478667No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG8980.528543092742244No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG8950.526777358579408No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA8540.5026456583539827No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT8210.48322258256278655No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGTGCACAGTTTGGAATGACTCTA7930.46674239704298387No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA7560.4449650090346731No Hit
CATAGAGAAGGAAAACTGGGCTGTGGAGAAAGGAGACTGACACAGTGTCA7350.43260486989482105No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC7340.43201629184054247No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT7290.4290734015691491No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC7020.413181794103625No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG6910.4067074355065597No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT6880.4049417013437237No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA6700.3943472963667077No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTTACGGTTGCAGGATGAATG6240.3672727058698889No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT5480.3225407737447102No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC5360.31547783709336613No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT5360.31547783709336613No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT5270.3101806346048581No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC5260.3095920565505794No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA5220.3072377443334648No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA5220.3072377443334648No Hit
CATAGAACTGACCATACACTTGCCCTAGAAGAAAGAAAACCCACAAAAGA5090.2995862296278421No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC5060.29782049546500605No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA5040.29664333935644877No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA5040.29664333935644877No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4630.27251163913102333No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACTTTCCCACCGCCCTTTT4590.2701573269139087No Hit
CATAGAACTGACCATACACTTGCCCTTCGGTAGGTGGCTTCTGGTGCATC4570.2689801708053513No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT4540.2672144366425154No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT4490.264271546371122No Hit
CATAGACAGGGGCCAGAACTCCTAAGTAGACAGGGGTGTGGTGTTCTGTC4410.2595629219368927No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4360.25662003166549935No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT4330.2548542975026633No Hit
CATAGACAGGGGCCAGAACTCCTAAGGTCTCATAGACAGGGGTGTGGTGT4310.253677141394106No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGCTTTTACAAACTCAAGTGAT4270.25132282917699134No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT4200.2472027827970406No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3790.22307108257161526No Hit
CATAGACTCAGAACTGGCTCTAATTCCTTACGGTTGCAGGATGAATGGGG3500.20600231899753385No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG3480.20482516288897654No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT3420.20129369456330454No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTATGGTAGGTGGCTTCTGG3400.20011653845474717No Hit
CATAGATGGCCCACTGACATTTTCCTAGAAGGAAAACAGGGCTGCATGGT3370.19835080429191115No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC3240.19069928958628848No Hit
CATAGAGCAGACAATGGATGATCAAGTGATCTGCTTTTACAAACTCAAGT3210.18893355542345247No Hit
CATAGACCAGGACAATCACAGGGCACATGTACACGGCAGGACTGTCTATG3130.18422493098922316No Hit
CATAGACAGGGGCCAGAACTCCTAAGTCTCATAGACAGGGGTGTGGTGTT3120.18363635293494446No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT3120.18363635293494446No Hit
CATAGACGTGTGGTTGGGATGTCAGCCGGCAGCCCCTAGAAGATTGGATC2950.1736305260122071No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTAGGTTGCAGGATGAATGGGGACA2940.17304194795792843No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2690.15832749660096174No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2660.15656176243812572No Hit
CATAGACTTGTTGCCGAGACTGGAGTAGATACATGTACACGGCAGGACTG2580.15185313800389638No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTAGTGTGGGTAGAATCTTGA2390.14067015497260169No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCAGGAGTTGACAAACGACAG2390.14067015497260169No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTGGGATACTGCTCACGATGG2380.14008157691832301No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG2320.13655010859265101No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2270.1336072183212577No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT2180.12831001583274967No Hit
CATAGAACTGACCATACACTTGCCCTGGATCTCAGAGTTAGCTTGCCTCT2120.12477854750707765No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGACACTTGAAAGCTCCCTG2060.12124707918140563No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2030.11948134501856963No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT2020.11889276696429096No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCAGGGCTGCATGGTGACTTTTC1990.11712703280145496No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1980.1165384547471763No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATACGGTAGCAGCTCCTCTTCT1930.11359556447578295No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTGAAGGATAGTTGGGTGC1910.11241840836722562No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG1900.11182983031294694No Hit
CATAGACTTGTTGCCGAGACTGGAGTGCACAGGACATTGGGGAATTCTAT1850.10888694004155361No Hit
CATAGAACATCTCCCTGTTCCTCCCACACTGAACGAAATTTAGGTGAGCA1850.10888694004155361No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCTCCTCTTCTCTTCCCTCTATGT1800.10594404977016027No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAAGAGGAGTTGACAAACGACA1800.10594404977016027No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1790.1053554717158816No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1790.1053554717158816No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTAGCAGCTCCTCTTCTCTT1760.1035897375530456No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1750.10300115949876693No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG1730.10182400339020958No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)