FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804196

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804196
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60060
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1142519.022644022644023No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC791913.185148185148185No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA37806.293706293706294No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT23223.866133866133866No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT22993.827838827838828No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT17192.862137862137862No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA12472.0762570762570762No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT12022.0013320013320013No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA10751.78987678987679No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA9971.66000666000666No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC9221.535131535131535No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA8011.3336663336663337No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG7911.317016317016317No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT7111.1838161838161838No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT5910.984015984015984No Hit
CATAGAGAGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA5380.8957708957708957No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC4490.7475857475857476No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT4310.7176157176157176No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG3980.6626706626706627No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT3860.6426906426906427No Hit
CATAGAGCAACAGGGACTCTCATTCACTGCTGGTGGGAATGCAAACTGGA3800.6327006327006327No Hit
CATAGACACCATGCCTGGCTAATTTTTAAAAAGTAGCTGGGCATGGTGGC3720.6193806193806194No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT3710.6177156177156178No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA3470.5777555777555777No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG3000.4995004995004995No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT2760.4595404595404595No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG2690.4478854478854479No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT2670.4445554445554446No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC2380.3962703962703963No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT2190.36463536463536467No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA1980.32967032967032966No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTATACGTGAATGTGGATCAGA1980.32967032967032966No Hit
CATAGACAGGGAGGCGTATAAGTGATGAAATCTCTACTAAAAATACAAAA1900.31635031635031635No Hit
CATAGACCAATAAAAGTTGATGGGATGAAGTAAGAAACATTTTAGAGCAC1880.313020313020313No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC1800.2997002997002997No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG1750.2913752913752914No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTGGTCTCATAGATTGAGCTT1610.2680652680652681No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGAATGGTTCTACACATAG1600.2664002664002664No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT1340.2231102231102231No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTGCTTCTTTCAAAAGTCTGG1240.20646020646020646No Hit
CATAGATGAAAGCCTGTTGAATTTATGATGAATCTGTGAGTTGCTGATGC1210.2014652014652015No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1160.19314019314019315No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1150.1914751914751915No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA1140.18981018981018982No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA1120.1864801864801865No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT1060.17649017649017648No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA1040.17316017316017315No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGC960.15984015984015984No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT930.15484515484515485No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA910.15151515151515152No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTT900.14985014985014986No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT870.14485514485514486No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA870.14485514485514486No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTTTA850.14152514152514153No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGATCTGTTATTCAAAGGT840.13986013986013987No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCTGTCTCTA820.13653013653013654No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACTTGCG810.13486513486513488No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC780.12987012987012986No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGACCTGATTGGCCATTTG770.1282051282051282No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGTCTGTTATTCAAAGG770.1282051282051282No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG760.12654012654012653No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA750.12487512487512488No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA740.12321012321012322No Hit
CATAGATTGGAACTTTGCCAGCCTTAATAGCCAGCAGAATTACCTCTGGA740.12321012321012322No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACGGTGAAACCCTATCTCTA680.11322011322011322No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCCA670.11155511155511155No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA660.10989010989010989No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG630.1048951048951049No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA630.1048951048951049No Hit
CATAGATGCCCTTTTTGTGTACTTCCAATGCCCTTTTTGTGTGCTTCTTT620.10323010323010323No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGAT620.10323010323010323No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)