FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60060
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1121018.664668664668664No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA841514.010989010989011No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT36005.994005994005994No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT23903.9793539793539794No Hit
CATAGACCCTGGATTAGCATGAGGAACATGGCTTCCCATTTCAGACAAGG23683.942723942723943No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG17502.9137529137529135No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT11721.9513819513819513No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA10971.8265068265068265No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA9771.6267066267066268No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCACC9381.5617715617715617No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG7981.3286713286713288No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA7871.3103563103563103No Hit
CATAGATGGAGAGAGTGAGGGAAAGGAAATTATGGGAGCCCTGTGAAACG6891.147186147186147No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG6571.0939060939060938No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC5960.9923409923409924No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGGTTAAACAATATCCAAATCC5400.8991008991008992No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT4440.7392607392607392No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT4250.7076257076257076No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG3970.6610056610056609No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT3840.6393606393606394No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT3740.6227106227106227No Hit
CATAGACTGCCTCAGCCTCCTGAGTAACTGGAACCACAGGCATGTGCCAC3700.6160506160506161No Hit
CATAGATATGCCCATGGTTAGGAAGGAAGGATCAATATTGTTAAAATGGG3670.6110556110556111No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC3400.5661005661005661No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA3160.5261405261405261No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT2890.48118548118548116No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAACATGGTG2820.46953046953046956No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAATACAAAAAATTAG2550.4245754245754246No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA2420.402930402930403No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT2150.357975357975358No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT1970.328005328005328No Hit
CATAGAAGTTCTGATCCACATTCACGTATACACTGGGGACTGTGACTCTG1960.32634032634032634No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCGCCAG1870.31135531135531136No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACGACAGCCCGGCTACTG1870.31135531135531136No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCACGCCAC1730.28804528804528806No Hit
CATAGACTGTCATTGCTTGCCCATTGGGATTTAAAAAAAGGAAAAGAACA1720.2863802863802864No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTAAGCTCAATCTATGAGACCA1540.2564102564102564No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACATAGAGCAGGAATTAGACTC1410.23476523476523478No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTTGTA1360.22644022644022643No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA1350.2247752247752248No Hit
CATAGACCAGACTTTTGAAAGAAGCACAACCCCTTAAGAAAATTTAATTG1280.21312021312021312No Hit
CATAGATGCATCAGCAACTCACAGATTCATCATAAATTCAACAGGCTTTC1220.20313020313020314No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG1150.1914751914751915No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG1120.1864801864801865No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTACTG990.16483516483516483No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA950.15817515817515818No Hit
CATAGACTGCCTCAGCCTCCTGAGTAACTGGGATTACAGGTGCCACCATG940.1565101565101565No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT880.14652014652014653No Hit
CATAGAGCAGAAAACCTTTGAATAACAGATCATAGAGCAGGAATTAGACT870.14485514485514486No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCGCCAC850.14152514152514153No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCAC850.14152514152514153No Hit
CATAGAGTTCAAATGGCCAATCAGGTCATAGAGCAGGAATTAGACTCTTG800.1332001332001332No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA780.12987012987012986No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG770.1282051282051282No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACTCATAGAGCAGGAATTAGAC750.12487512487512488No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA720.11988011988011987No Hit
CATAGACCATCCAGAGGTAATTCTGCTGGCTATTAAGGCTGGCAAAGTTC700.11655011655011654No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAGGATCA680.11322011322011322No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA670.11155511155511155No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATTGGAAGTACA660.10989010989010989No Hit
CATAGACTGTCATTGCTTGCCCATTGTCATTGCTTGCTCATTATTATTGG650.10822510822510822No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA630.1048951048951049No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCATGCCAC620.10323010323010323No Hit
CATAGACCCTTACCAATAACACAATCAACACTATGCAAGACTAGGCAATT610.10156510156510157No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)