FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804198

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804198
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83291
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3560642.748916449556376No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG45455.4567720401964195No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA21442.574107646684516No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT15481.858544140423335No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT14551.7468874188087549No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA12691.5235739755795945No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT10401.2486343062275636No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG10251.2306251575800506No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA9031.0841507485802788No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT8230.9881019557935432No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC7810.9376763395805069No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG7220.8668403549002893No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTCTCGAAGA6820.8188159585069216No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT5340.6411256918514605No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA5310.6375238621219579No Hit
CATAGAGCCACCATGTACTTCTATATAGCTTGGCTGTCATGATTATCACC4740.5690890972614088No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT4690.5630860477122378No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT4490.5390738495155539No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT4470.5366726296958855No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT4230.5078579918598648No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT4210.5054567720401965No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACAGGTCAAGGTGG3890.46703725492550213No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGCCATCACAGTTCATTG3340.40100370988462136No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTATATTT2880.3457756540322484No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG2580.3097573567372225No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT2580.3097573567372225No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG2510.3013530873683831No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG2380.2857451585405386No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT2350.282143328811036No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2320.2785414990815334No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTCTATGTGTATGGAGGATGAT2120.2545293008848495No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGTAGATTTGGACCTGCG2100.25212808106518114No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG1960.23531954232750238No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTCTGTAATCCCAGCACTTT1920.23051710268816558No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC1820.21851100358982362No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTAGACCTGCG1790.21490917386032105No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1680.20170246485214488No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1680.20170246485214488No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1660.1993012450324765No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1660.1993012450324765No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1640.19690002521280814No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1640.19690002521280814No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1630.1956994153029739No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1600.1920975855734713No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG1590.19089697566363714No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT1580.18969636575380291No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1540.18489392611446615No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1510.18129209638496357No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1500.18009148647512935No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGTGAGGTCAAGGTGGGAGGATG1480.17769026665546098No Hit
CATAGAACCAAAAATGGCTAGGCATGTGACTTGGTTATGTAGACAGGGAT1460.17528904683579258No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1380.165684167557119No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT1300.15607928827844544No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1290.15487867836861124No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCAGCACTCATTCTATCTCCTGT1250.15007623872927447No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1230.14767501890960608No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1210.14527379908993768No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1130.1356689198112641No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA1130.1356689198112641No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG1130.1356689198112641No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG1120.13446830990142994No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA1110.13326769999159574No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1060.12726465044242474No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC1030.12366282071292216No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG970.116459161253917No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT930.11165672161458022No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG920.11045611170474601No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAGTTAATTAAAAAA920.11045611170474601No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC870.10445306215557504No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG870.10445306215557504No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC870.10445306215557504No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTTATGTAGACAGGGATTGATCTC860.10325245224574084No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG850.10205184233590664No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)