FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170192
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC108466.372802481902792No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA88075.1747438187458865No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA87365.133026229199963No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC72224.2434427000094015No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA54233.186401240951396No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA51333.016005452665225No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT50792.9842765817429724No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA44692.6258578546582685No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA43042.5289085268402745No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG31321.840274513490646No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT28471.672816583623202No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA27931.6410877127009493No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG25071.4730422111497603No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA24841.4595280624236155No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC21981.2914825608724265No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC20301.1927705180031964No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA19351.1369512080473818No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAGGATGACTTATGGAA17731.0417645952806243No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA16310.9583294161887751No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA14780.8684309485757262No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG14760.8672558052082354No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT14720.8649055184732537No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG13920.8178997837736204No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC13410.7879336279026041No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT13230.7773573375951865No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT13140.7720691924414779No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG12820.7532668985616245No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC12410.7291764595280624No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC12100.7109617373319544No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA11960.7027357337595187No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC11200.658080285794867No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG10630.6245886998213782No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT10290.604611262574034No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACACCCGTAATCCCTCCCTT10240.6016734041553069No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA10070.5916846855316349No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG9810.576407821754254No Hit
CATAGATTTGGCACTCACATACACGCCTGTTTCAGGGATTCATGTAAATT9580.5628936730281094No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT9540.5605433862931277No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA9490.5576055278744007No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA8510.5000235028673498No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA7860.4618313434238977No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT7820.45948105668891603No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA7660.45007990974898937No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT7640.4489047663814985No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA7460.438328476074081No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG7150.4201137538779732No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT6980.41012503525430105No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA6920.40659960515182847No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT6840.4018990316818652No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT6650.39073516969070227No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT6630.38956002632321146No Hit
CATAGAATCCCTGCCCTTGACCTTGGACACTGACAATGGGCACACTTAAC6360.3736955908620852No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGGCAAGTGTATGGTCAGTTCT6360.3736955908620852No Hit
CATAGAGCACCCAACTATCCTTCAGCAGGGCAAGTGTATGGTCAGTTCTA6290.3695825890758672No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA6290.3695825890758672No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTCATTTTGCTGGAACTCTATG6230.36605715897339475No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG6180.3631193005546677No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA6070.3566560120334681No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT5800.3407915765723418No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC5690.33432828805114223No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT4770.28027169314656386No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGCCTTCTCTGATACCATCC4760.27968412146281846No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT4730.2779214064115822No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA4720.2773338347278368No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4650.27322083294161886No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG4620.27145811789038266No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT4500.2644072576854376No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG4450.26146939926671053No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT4390.257943969164238No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC4370.2567688257967472No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT4230.24854282222431137No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT4110.24149196201936635No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTAGGAGTTCTGGCCCCTGTCT3870.22739024160947635No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC3860.22680266992573095No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT3610.21211337783209552No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG3600.21152580614835012No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC3500.20565008931089593No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG3460.20329980257591423No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3450.20271223089216883No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACTGGTGAAAAGTAGGGG3240.19037322553351507No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT3230.18978565384976967No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3170.18626022374729717No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT3060.17979693522609758No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC3030.17803422017486134No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG3030.17803422017486134No Hit
CATAGAATCCCTGCCCTTGACCTTGGAGGAGTCAGTGGAGCTGGGGACTG2990.17568393343987967No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2820.16569521481620758No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA2800.16452007144871675No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTGGGAGGAACAGGGAGAT2750.16158221302998965No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAACTTAGGAGTTCTG2670.15688163956002632No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCTACAATGGGCACACTTAACAC2620.15394378114129925No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGAACAAGGGCAT2570.15100592272257216No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTTAGGAGTTC2470.145130205885118No Hit
CATAGAACTTGTGCTTTTGGTGTCACAGCCCAGTTTTCCTTCTCTATGAG2310.13572905894519133No Hit
CATAGAATTGCCTACTTTGGGACCCATGTACAAGCACATTATTATTGGTT2170.12750305537275547No Hit
CATAGAAAAGTCACCATGCAGCCCTGAAAAGTCACCACAGCCCAGTTTTC2160.12691548368901007No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGAACAAGGGCATGGTCAAGTGT2110.12397762527028297No Hit
CATAGAATCCCTGCCCTTGACCTTGGCCCTGCAGTTATTCAGACAACATG2060.12103976685155589No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAACAAGGGCATGGT2040.11986462348406507No Hit
CATAGACAGAACACCACACCCCTGTCCTTAGGAGTTCTGGCCCCTGTCTA2040.11986462348406507No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGAGGATGACTT1990.11692676506533797No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT1950.11457647833035631No Hit
CATAGACAGAACACCACACCCCTGTCTACTTAGGAGTTCTGGCCCCTGTC1950.11457647833035631No Hit
CATAGATCATGAATGACTCCCACTCTGTGCCCTGTGATTGTCCTGGTCTA1920.11281376327912004No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG1870.10987590486039296No Hit
CATAGATCATGGGACTTCAGCATGGCGAGAGCATGCCAGCTGGTGGTGCT1860.10928833317664755No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT1780.10458775970668421No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCCCAGGGAACACGGTGGTGGTGG1730.10164990128795712No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)