FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170192
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG111166.531446836514054No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT88825.218811695026793No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT88655.2088229764031215No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG69304.07187176835574No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT53363.1352825044655446No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT50772.9831014383754817No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT50402.9613612860769014No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT45112.6505358653755757No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT42642.505405659490458No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT32501.909607972172605No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG31571.8549638055842814No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT27591.6211102754536053No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC25141.4771552129359782No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG24951.4659913509448153No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG20221.188069944533233No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT19481.1445896399360722No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGCATTCTTTCTCCA17981.0564538873742597No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG16290.9571542728212842No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT14550.8549167998495817No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG14550.8549167998495817No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC14190.8337642192347468No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG13710.8055607784149666No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13710.8055607784149666No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC13330.7832330544326407No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT13200.7755946225439504No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT13140.7720691924414779No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC12900.7579674720315879No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12030.7068487355457366No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT11940.7015605903920278No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA11460.6733571495722479No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC11300.6639560026323211No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA10650.625763843188869No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG10320.6063739776252703No Hit
CATAGAAAAGGGAGGGATTACGGGTGTACGGTTGCAGGATGAATGGGGAC10140.5957976873178528No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC9890.5811083952242174No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT9830.5775829651217449No Hit
CATAGACGTGTGGTTGGGATGTCAGCCGGCAGCCCCTAGAAGATTGGATC9180.5393908056782928No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT9180.5393908056782928No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA8420.4947353577136411No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT7740.4547804832189527No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC7720.4536053398514619No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT7700.45243019648397104No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT7540.4430290495440444No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC7410.4353906176553539No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7120.41835103882673685No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT7060.4148256087242644No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT6920.40659960515182847No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA6870.40366174673310146No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT6710.3942605997931748No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT6530.38368430948575727No Hit
CATAGAACTGACCATACACTTGCCCTGGATCTCAGAGTTAGCTTGCCTCT6400.3760458775970668No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT6370.3742831625458306No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6260.367819874024631No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCAGTGTCCAAGGTCAAGGGCAGG6180.3631193005546677No Hit
CATAGAACTGACCATACACTTGCCCTGCTGAAGGATAGTTGGGTGCTCTA6140.360769013819686No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTAGGTGGCTTCTGGTGCATCTATG6140.360769013819686No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT5790.3402040048885964No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5470.32140171100874304No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG5440.31963899595750683No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT4820.28320955156529093No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4790.2814468365140547No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT4770.28027169314656386No Hit
CATAGAGGGATGGTATCAGAGAAGGCTACGGTTGCAGGATGAATGGGGAC4700.276158691360346No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCTCTTCACCTCCCAGATCTATG4620.27145811789038266No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG4420.25970668421547427No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT4420.25970668421547427No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT4370.2567688257967472No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC4290.25206825232678387No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT4160.24442982043809347No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT4000.23502867349816675No Hit
CATAGACAGGGGCCAGAACTCCTAAGAAAGAAAACCCACAAAAGACGTCT3910.22974052834445802No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG3720.2185766663532951No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC3650.21446366456707716No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3590.2109382344646047No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC3570.20976309109711383No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC3470.20388737425965966No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3400.19977437247344176No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC3350.19683651405471464No Hit
CATAGAACTGTCCCCTACTTTTCACCAGTCTCATAGAACTTTCCCACCGC3260.19154836890100593No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT3160.18567265206355174No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3140.18449750869606094No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT3140.18449750869606094No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA3120.18332236532857007No Hit
CATAGACCAGGACAATCACAGGGCACCTGCAGGTCCATTAGTCCCAACCT2980.17509636175613424No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA2920.17157093165366175No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2840.16687035818369841No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT2820.16569521481620758No Hit
CATAGAACATCTCCCTGTTCCTCCCACACTGAACGAAATTTAGGTGAGCA2730.16040706966249885No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2670.15688163956002632No Hit
CATAGACAGGGGCCAGAACTCCTAAGTTGGTCTCATAGACAGGGGTGTGG2580.15159349440631759No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGGTCTCATAGACACTTGAAAG2570.15100592272257216No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTAGACTGGGTCCCAAAGTAGGCAA2530.1486556359875905No Hit
CATAGACAGGGGCCAGAACTCCTAAGACTTGGTCTCATAGACAGGGGTGT2390.14042963241515466No Hit
CATAGAGAAGGAAAACTGGGCTGTGACACCAAAAGCACAAGTTCTATGTG2340.13749177399642756No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGACTTTTCAGGGCTGCATGGTGA2170.12750305537275547No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACATGGGTCCCAAAGTAGGC2150.12632791200526464No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCTTGGTCTCATAGATGGGTC2080.12221491021904674No Hit
CATAGAACATCTCCCTGTTCCTCCCATCCCCTGGCTTATGAAGTAAGAAC2080.12221491021904674No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT2070.1216273385353013No Hit
CATAGACACTTGACCATGCCCTTGTTGGTCTCATAGACACTTGAAAGCTC2050.12045219516781047No Hit
CATAGACAGGGGCCAGAACTCCTAAGGACAGGGGTGTGGTGTTCTGTCTA2010.1181019084328288No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1990.11692676506533797No Hit
CATAGACAGGGGCCAGAACTCCTAAGTAGACAGGGGTGTGGTGTTCTGTC1950.11457647833035631No Hit
CATAGATCCATGGTGTGCAAGGACAAGAGACTTGGTCTCATAGATCCATG1910.11222619159537463No Hit
CATAGACCAGGACAATCACAGGGCACAGAGTGGGAGTCATTCATGATCTA1900.11163861991162922No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG1870.10987590486039296No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGGCATGCTCTCGCCATGCTGAA1840.10811318980915671No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT1790.10517533139042963No Hit
CATAGATCCATGGTGTGCAAGGACAATGGGGAATTCTATGTGTAGAACCA1720.10106232960421173No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)