FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804214

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804214
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences134270
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1614712.025768972964922No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC70835.275191777761227No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC57584.288374171445595No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA49323.673195799508453No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG46123.4348700379831683No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC38872.894913234527445No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA31512.3467639830192897No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA30742.289416846652268No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT26882.001936396812393No Hit
CATAGATGAAAGCCTGTTGAATTTATGATCTATCCAGGAATTTTATTTTA25361.8887316600878827No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT22971.7107321069486856No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC22191.6526402025768974No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA18021.3420719445892606No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA16961.2631265360840098No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT16681.2422730319505475No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA14671.092574662992478No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT13240.9860728383108662No Hit
CATAGATGCCCTTTTTGTGTACTTCCATACGTGAATGTGGATCAGAACTT13020.9696879422060027No Hit
CATAGAGCAACAGGGACTCTCATTCACTGCTGGTGGGAATGCAAACTGGA12440.926491397929545No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA12170.906382661800849No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTTCTTTCAAAAGTCTGGTCT10100.7522156848141803No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG9910.7380650927236166No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG9830.7321069486854845No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA9530.709763908542489No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT8860.6598644522231325No Hit
CATAGATTGGAACTTTGCCAGCCTTATCCCCAGAAATGTTAGCATGTCTA8480.6315632680420049No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT8050.5995382438370447No Hit
CATAGAGCTGGCTTCCTAACTTCCAATGGGCAAGCAATGACAGTCTATGA8000.5958144038132122No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC7720.5749608996797497No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG7590.565278915617785No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTAGCAGAATTACCTCTGGATG7150.5325091234080583No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGGAGACAGCCGCTCA7020.5228271393460937No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT6920.5153794592984285No Hit
CATAGAGCAACAGGGACTCTCATTCAACACTGACTGATACAGGAAGGCCT6840.5094213152602964No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA6740.5019736352126313No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT5700.4245177627169137No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA5310.3954718105310196No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA5220.38876889848812096No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC5100.37983168243092275No Hit
CATAGAGCTGGCTTCCTAACTTCCAACACTGGAGACAGCCGCTCACCTCT4910.36568109034035895No Hit
CATAGATGAAAGCCTGTTGAATTTATGACACTGACTGATACAGGAAGGCC4610.3433380501973635No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACACTGGAGACAGCCGCTCA4260.3172711700305355No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA3880.2889699858494079No Hit
CATAGATCATGGGACTTCAGCATGGCCGGTAGCAGAATTACCTCTGGATG3530.2629031056825799No Hit
CATAGAAACCCCAAAGGCTATGTTCATTCTATGCCTTCATTCTGCCTGCA3430.25545542563491475No Hit
CATAGACAGGGAGGCGTATAAGTGATGTACACTGGAGACAGCCGCTCACC3420.2547106576301482No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA3330.24800774558724958No Hit
CATAGAAACCCCAAAGGCTATGTTCAGAACCTGGAGACAGCCGCTCACCT3270.24353913755865048No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT3220.23981529753481792No Hit
CATAGATCATGGGACTTCAGCATGGCGAATCCTTTCCCTCACTCTCTCCA3010.2241751694347211No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGGAGACAGCCGCTCACCTC2960.22045132941088852No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTACAAGCAATGGGGAAAGGAT2740.2040664333060252No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATATCCCCAGAAA2690.20034259328219262No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA2580.19215014522976093No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT2490.1854472331868623No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG2420.18023385715349668No Hit
CATAGATCATGGGACTTCAGCATGGCAAGCAATGGGCAAGCAATGACAGT2410.17948908914873016No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG2380.17725478513443063No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT2310.17204140910106502No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG2260.16831756907723244No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG2230.1660832650629329No Hit
CATAGATCCCATCCAATAATAATGAGCAGAACATCCTATCCCCAGAAATG2150.16012512102480078No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT2090.15565651299620167No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC2020.15044313696283607No Hit
CATAGACCTTTGGGTTCATATCATCTGGTCATAGAGCAGAATTACCTCTG2020.15044313696283607No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA1970.1467192969390035No Hit
CATAGAGCTGGCTTCCTAACTTCCAATCTATACAAGCAATGGGGAAAGGA1960.14597452893423699No Hit
CATAGATCATGGGACTTCAGCATGGCACCTTCCTAACCATGGGCATATCT1950.14522976092947046No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA1950.14522976092947046No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA1950.14522976092947046No Hit
CATAGATCATGGGACTTCAGCATGGCATCCTTTCCCTCACTCTCTCCATC1930.14374022491993743No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT1770.1318239368436732No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA1730.12884486482460714No Hit
CATAGATTGGAACTTTGCCAGCCTTAATCTGTGAGTTGCTGATGCATCTA1700.12661056081030758No Hit
CATAGATCATGGGACTTCAGCATGGCTCTACACATAGATCATGGAGACAG1690.12586579280554108No Hit
CATAGAGATGTTTGATAAGCAGGGTGACTGATACAGGAAGGCCTTTCTAT1640.1221419527817085No Hit
CATAGACAGGGAGGCGTATAAGTGATGGGGAAAGGTGTTGATTGTGTTAT1630.12139718477694199No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT1630.12139718477694199No Hit
CATAGATCATGGGACTTCAGCATGGCCTTCCTAACCATGGGCATATCTAT1620.12065241677217547No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA1580.11767334475310941No Hit
CATAGATGCCCTTTTTGTGTACTTCCACCATAGAGCAGAATTACCTCTGG1560.11618380874357638No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA1530.11394950472927684No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA1520.11320473672451033No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT1500.11171520071497729No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTAGACTGGAGACAGCCGCTCA1410.10501228867207865No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTGGAGACAGCCGCT1400.10426752066731214No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC1400.10426752066731214No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT1370.1020332166530126No Hit
CATAGACAGGGAGGCGTATAAGTGATGAAATCTCTACTAAAAATACAAAA1370.1020332166530126No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1360.10128844864824608No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC1360.10128844864824608No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)