FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804220

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804220
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91655
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3655239.879984725328676No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG44614.867164911897878No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC34163.7270198025203207No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT21192.3119306093502807No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG20682.2562871638208497No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA18562.024984998090666No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA18041.9682505046096774No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT12311.3430800283672468No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT9661.053952321204517No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT8120.8859309366646664No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACACTGACGACATGGTATATTTTC6690.7299110795919481No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGACTGTGTTAATTTAAAAGAACA6380.6960885930936664No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG6350.692815449238994No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT6170.6731765861109595No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA6070.6622661065953849No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGACAGGATGCGCAGATGGTCT6070.6622661065953849No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT6000.6546287709344826No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGCTGTCATGATTATCACCTTCTA5880.6415361955157929No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT5220.5695270307129998No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT5160.5629807430036551No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC4910.5357045442147182No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT4410.48115214663684464No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATGATTGTAAGTTTCT4320.4713327150728274No Hit
CATAGATGAAAGACAAGCAGGGAAGCTCTACACTGCCATCACAGTTCATT4310.47024166712127No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT4280.46696852326659755No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA3790.4135071736402815No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC3640.39714145436691944No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC3570.38950411870601714No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCAAAGA3210.35022639244994813No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA3150.3436801047406034No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG3070.3349517211281436No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2820.3076755223392068No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGAGGTCAAGGTGGGAGGATGGTCT2740.29894713872674705No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC2670.29130980306584475No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTTCTACA2530.27603513174404015No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC2480.27057989198625276No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG2460.26839779608313785No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT2350.2563962686160057No Hit
CATAGATCCACAAAGACCAAGAGTGTCACTTGGTCTGTTCGGCCACTCAT2300.2509410288582183No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2270.24766788500354592No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1960.2138453985052643No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1950.21275435055370684No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1930.2105722546505919No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1780.19420653537722984No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCAGCACTCATTCTATCTCCTGT1750.19093339152255742No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATCACAGTTCATTGTA1640.17893186405542524No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1630.17784081610386776No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1540.16802138453985052No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGC1510.16474824068517813No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1480.1614750968305057No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1410.1538377611696034No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCCAGCACTTT1360.14838252141181604No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGTCTCTGACTGTGTTAATTTA1360.14838252141181604No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1340.1462004255087011No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1330.14510937755714365No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTCGTTTGCTTTGTCAAAGA1320.14401832960558617No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTAGACCTGCG1300.14183623370247123No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1290.14074518575091377No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1280.13965413779935626No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTGTGTGCCTGTAGTCCCAGC1270.1385630898477988No Hit
CATAGATGAAAGACAAGCAGGGAAGCAAACTCTATGATGCCAGCAAGGGA1160.12656156238066663No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1150.12547051442910914No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG1130.12328841852599422No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCGCTTCTGTAATCTCAGC1120.12219737057443676No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGAAGATCG1050.11456003491353445No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1040.11346898696197698No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATACCAGC1030.11237793901041951No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTTACTCCTGTAATTCCAGC1020.11128689105886203No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1020.11128689105886203No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG990.10801374720418962No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG980.10692269925263215No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGACGACATGGTTCTA960.10474060334951722No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG940.10255850744640227No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG930.1014674594948448No Hit
CATAGAAAATAATGTGGCCGGGCATGGTACCTCACGCCTATAATCCCAGT930.1014674594948448No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)