FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804225

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804225
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences147663
Sequences flagged as poor quality0
Sequence length150
%GC35

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA110167.4602303894679105No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT75715.127215348462377No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT62154.208908121872101No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG55943.788355918544253No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA54403.6840643898606964No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA47603.2235563411281096No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT45723.0962394100079234No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA37222.52060434909219No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG34632.345204959942572No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT23551.594847727595945No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG21901.48310680400642No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA21531.4580497484136175No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA20991.4214799916025003No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC19841.3435999539491952No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG19141.2961947136384877No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG18981.2853592301388974No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT18181.231181812640946No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT15261.0334342387734234No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA14360.9724846440882279No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA13360.9047628722157885No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT13330.9027312190596154No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT10900.7381673134095881No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT10870.7361356602534149No Hit
CATAGACACACTGACAATTTGCACCTGGGAAAGGTATGTGGCACATCTAT9890.6697683238184243No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT9750.6602872757562829No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT9580.6487745745379682No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA9550.646742921381795No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT9140.618976994914095No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT9120.6176225594766461No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG9020.6108503822894022No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA8650.5857933266965997No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG8550.5790211495093557No Hit
CATAGACCACACACACAACTGAGAGTCTCATAGGGCACTGAGACCACATC8240.5580274002288996No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA8010.5424513926982386No Hit
CATAGACCACACACACAACTGAGAGTCCATCCAGTCCAGCTCCTTCTATG7870.532970344636097No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT7580.5133310307930896No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC7380.49978667641860186No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGGAAGACACAGCACACTCT7230.4896284106377359No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA7200.4875967574815627No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA7180.48624232204411394No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT6820.4618624841700358No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC6780.45915361329513826No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT6570.44493204120192603No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGCTTACACTGCAC6480.4388370817334065No Hit
CATAGAGGCACGATCTTGTTTCACTGTACGATAGCGAGAAGAGTGGAGGC6410.43409655770233574No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTACGGCAACATATCAGAAGCATC6320.4280015982338162No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC6210.4205522033278479No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGAATGATATTGTTGCAGATTT5840.39549514773504535No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT5800.3927862768601477No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC5060.3426721656745427No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCACTGAGCTGAGGGTCACTTC4680.3169378923630158No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4610.312197368331945No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA4600.31152015061322064No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC4520.30610240886342555No Hit
CATAGACACAGGCCAATCTCAGCAGAACAATGCCTCACACACAGGTCTAT4440.3006846671136304No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTGCAGCATTCTCTCAGGGCTGT4400.29797579623873277No Hit
CATAGAGGCACGATCTTGTTTCACTGTACGGCAACATATCAGAAGCATCT4380.29662136080128404No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGACCTTTTTCTGT4360.29526692536383525No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT4360.29526692536383525No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGCACTATTCTCTGGCCCGTC4310.29188083677021326No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4310.29188083677021326No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT3960.2681782166148595No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA3950.2675009988961351No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC3870.26208325714633995No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC3870.26208325714633995No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAGGAGAATGATAT3720.2519249913654741No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT3670.24853890277185212No Hit
CATAGATTCAACCAGCCATCCCCAATACGGAAGACACAGCACACTCTTCT3650.24718446733440333No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC3550.24041229014715942No Hit
CATAGACCACACACACAACTGAGAGTTACGGAAGACACAGCACACTCTTC3530.23905785470971064No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3510.23770341927226182No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGGAGTTTCTAGCTTAC3450.2336401129599155No Hit
CATAGATACCTGTCCTCTGCCTCGAGCATAGACCTTTTTCTGTAGTCAAG3390.22957680664756913No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAACCAAAATGTCAGGGGATCCTCT3340.22619071805394714No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3330.2255135003352228No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT3270.2214501940228764No Hit
CATAGACCACACACACAACTGAGAGTGTCTACGGAAGACACAGCACACTC3260.220772976304152No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGCATTCTCTC3200.21670966999180566No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTACGATAGCGAGAAGAGTGGA3130.2119691459607349No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT3110.21061471052328612No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGGAAGACACAGCACACTCT3090.20926027508583736No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACTAACCTCCCACCCC3020.2045197510547666No Hit
CATAGAGCCCCCAGAGAAGAATGACCTCTAGCCAAATTCCTTACCGATCT2980.201810880179869No Hit
CATAGAGGCACAGGGATAATGAGGGAGAGGACAGGTATAGGAATCTTTGG2970.2011336624611446No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC2960.20045644474242022No Hit
CATAGACACACTGACAATTTGCACCTGACACTGTCTTCAGCTCTTTGAGG2920.19774757386752267No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG2900.19639313843007386No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC2820.19097539668027874No Hit
CATAGATCACCAGATGCCAGTTGTGCTACCGTAGAGGAGAATGATATTGT2810.19029817896155435No Hit
CATAGATATTCTGCCCCCTCCTCTCCCACACTGAAGCAGAGGTAGATGGA2810.19029817896155435No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACACTGAAGCAGAGGTAGATGGAT2800.18962096124282996No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCCCCCAGGTAGCAAAACAGAGTC2790.18894374352410556No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTGGGAAAGGTATGTGGCACAT2760.18691209036793238No Hit
CATAGAGGCACAGGGATAATGAGGGAGTACGATAGCGAGAAGAGTGGAGG2710.18352600177431044No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGTTTTCTGTTTACTCGGAGATTT2500.16930442968109818No Hit
CATAGAGGCACAGGGATAATGAGGGAGATGGGAAAGGTATGTGGCACATC2400.16253225249385425No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATACTTTTCTAATCAATAGTAC2330.1577917284627835No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACACTGTCTTCAGCTC2330.1577917284627835No Hit
CATAGATCCCATACTCCTCCATTACCCTGTCGTCAGAGGAGAATGATATT2310.1564372930253347No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2310.1564372930253347No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTACGGTAGCAGAGACCTTTTTCTG2300.15576007530661032No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTCAACCAAAATGTCA2280.15440563986916153No Hit
CATAGATCCCATACTCCTCCATTACCCTAACCTCTCTTGCTCCTTCTCAC2260.15305120443171277No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGGCAACATATCAGAAGCAT2240.15169676899426396No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAGACTCTGTTTACTCGGAGATTTG2200.14898789811936639No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA2140.14492459180702005No Hit
CATAGATATTCTGCCCCCTCCTCTCCGTAAGGAATCTTTGGGAGGCTATT2120.14357015636957124No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2120.14357015636957124No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2110.14289293865084687No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACTGACGGCAACATAT2100.14221572093212248No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCACTGAGCTGAGGGTCAC2080.14086128549467367No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA2080.14086128549467367No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCTATGAGCCCCAGGTAGCAAA2020.13679797918232733No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCAGTGTCAGGGCAGAGAGTGTGTT2020.13679797918232733No Hit
CATAGATCACCAGATGCCAGTTGTGCTACCGTATCTGTTTACTCGGAGAT1990.13476632602615415No Hit
CATAGAGCAGCATTTCTCTCCAAGGAACAATGCCTCACACACAGGTCTAT1960.13273467286998097No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1940.1313802374325322No Hit
CATAGAAACAGCAAAGCCCTCCACCAGAGGAGAATGATATTGTTGCAGAT1900.12867136655763461No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGGCATTCTCTCAGGG1880.12731693112018583No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGTGGGTAGAGAGTTCTGTAGATGT1870.12663971340146143No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGATAGCGAGAAGAGTGGAG1840.12460806024528825No Hit
CATAGAGGCACGATCTTGTTTCACTGTATAGATCGGTAAGGAATCTTTGG1800.12189918937039068No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1760.11919031849549312No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGGAGGAGAATGATATT1730.11715866533931994No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGAAGTGTATTAAT1670.11309535902697357No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTTGTATATCTAGGAGTAGAACTG1670.11309535902697357No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGGAAACATTGGAAAGATG1660.1124181413082492No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT1650.1117409235895248No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG1610.10903205271462722No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTAGGAGGAGCTGA1600.10835483499590283No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1600.10835483499590283No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGGAAGACACAGCACACTCTTCT1590.10767761727717845No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA1560.10564596412100526No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)