FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105701
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3570833.78208342399788No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG38323.625320479465662No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA31552.9848345805621515No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG27382.590325540912574No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA24512.318804930889963No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG23652.2374433543675085No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG18231.724676209307386No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA17551.6603437999640493No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC12381.1712282759860362No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT10130.9583636862470555No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA9380.8874088230007284No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG9260.876056044881316No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA9190.8694335909783256No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC8900.8419977105230794No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG6570.6215646020378236No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC6540.6187264075079706No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA5860.5543939981646342No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT5620.5316884419258097No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC5390.5099289505302693No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGCATGTTGAGATGAATAATTG5130.48533126460487597No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC4700.4446504763436486No Hit
CATAGAAGATGGTCTGCTACACTGGTTAGAAAACCACTTGAACATTGCCT3990.3774798724704591No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA3930.371803483410753No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC3890.36801922403761556No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCGGAGGGAAGGAAGGGCAAAC3520.3330148248360943No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA3370.3188238521868289No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT3270.3093632037539853No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA2640.2497611186270707No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG2610.2469229240972176No Hit
CATAGACACCTGGATCCTGTGTTGTCTACACTGAGCAGAGTTGGGTGTGT2550.24124653503751148No Hit
CATAGAAGATGGTCTGCTACACTGGTCTCATAGGAAAGCAATCACCGCCA2510.23746227566437406No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2470.2336780162912366No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG2420.22894769207481483No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT2380.22516343270167738No Hit
CATAGATCAACAATGGATGAGCAAAAGGGATTATCAGTAGTGCTCACATC2330.2204331084852556No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGCCATGGGTCCTTTTC2270.21475671942554944No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA2220.21002639520912764No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT2080.1967814874031466No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA2080.1967814874031466No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2030.19205116318672483No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAGTTTTTCCAAATATAAGAT1900.17975232022402815No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC1890.1788062553807438No Hit
CNTAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG1840.17407593116432202No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1820.17218380147775328No Hit
CNTAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA1800.17029167179118457No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC1750.16556134757476276No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAAACCACTTGAACATTG1740.1646152827314784No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG1690.15988495851505663No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT1650.1561006991419192No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGTGCAGAAAGGGATTCATCCAAGT1650.1561006991419192No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG1640.15515463429863482No Hit
CNTAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA1620.1532625046120661No Hit
CATAGACCCTTCTCCATGCCACATCAAGAATGAGGAGAGTACTACTTTCT1580.14947824523892866No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA1570.14853218039564434No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAACTGTAGG1550.1466400507090756No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1500.1419097264926538No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGAGAGGAGAAGGCCAGAGACCAAA1490.14096366164936946No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1470.13907153196280073No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAATAGTTTTTCCAAATATAAG1470.13907153196280073No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGACGACATGGTTCTACACA1460.13812546711951637No Hit
CATAGAGAGGTCGCCCAGGTATTTCTACACTGGAGACAGCCGCTCACCTC1450.13717940227623202No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAAGTGCAGC1440.13623333743294766No Hit
CNTAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG1410.1333951429030946No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCCGATTTGGACCTGCG1400.1324490780598102No Hit
CATAGACCCTTCTCCATGCCACATCAGCATGTTGAGATGAATAATTGAGA1400.1324490780598102No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGAAGGAGGGAAGGAAGGGCAAACT1370.12961088352995714No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAATGGCATTAAATGACTTGCCCAA1370.12961088352995714No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA1370.12961088352995714No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1360.1286648186866728No Hit
CATAGACCCTTCTCCATGCCACATCATGCCACACTCATGCAAAGCTGGTC1340.12677268900010405No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1290.12204236478368229No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA1250.11825810541054485No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT1250.11825810541054485No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGCCCTGCG1240.11731204056726048No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTGACATGGTTCTACACATAGAT1240.11731204056726048No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA1220.11541991088069176No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1170.11068958666426998No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT1170.11068958666426998No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1160.10974352182098561No Hit
CATAGAAGATGGTCTGCTACACTGGTGAGCACCCTGAAGTTTGAGAGCAA1160.10974352182098561No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA1160.10974352182098561No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC1140.10785139213441688No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1130.10690532729113254No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGTCTTCTGTGTTTGGTCTATGAG1120.10595926244784817No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1120.10595926244784817No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1080.10217500307471074No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCAGCTATATTGGAGGAAAAGT1070.10122893823142638No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGTAGATTTGGACCTGCG1060.10028287338814201No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)