FastQCFastQC Report
Wed 8 May 2024
EGAF00005804230

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804230
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences127540
Total Bases19.1 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3040623.84036380743296No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG98227.701113376195703No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG52914.148502430610005No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC47113.693743139407245No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA42073.2985729967069153No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGCCATCACAGTTCATTG30812.4157127175787987No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT20141.579112435314411No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC14041.1008311118080603No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGATGAGGGTATAAGG13521.0600595891485023No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA11840.9283362082483926No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGACAGACAGGATGCGCAGATGGTC11020.8640426532852439No Hit
CATAGAGCCACCATGTACTTCTATATAGCTTGGCTGTCATGATTATCACC10810.84757723067273No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGATGAGGGTATAAGGTC9130.7158538497726203No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT9020.707229104594637No Hit
CATAGAGCATTACCCTCAAACTATCCCTAACACTGCCAGCAAGGGAACAA8850.6938999529559354No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG8790.6891955464952172No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTACATGGTTCCATGTGTGTGCG8630.6766504625999686No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT8170.6405833464011291No Hit
CATAGAACTCCATCATAAGTCAAAGAGCACACTGCCATCACAGTTCATTG8160.639799278657676No Hit
CATAGACACATGTAGGATGGGGTGGCTGCCATGATTGTAAGTTTCTTGAG8100.6350948721969578No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGTTGCAATATAGATGAAATGC7870.617061314097538No Hit
CATAGACTTCAGCCCTCACAAGCCTTACAGACAGGATGCGCAGATGGTCT7740.6068684334326486No Hit
CATAGATCCACAAAGACCAAGAGTGTCAGTGTGCCAGCAAGGGAACAAAA7590.595107417280853No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAAGTCTCTCCAGACAGGATGCG7140.5598243688254665No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTATATTTTCT7030.5511996236474832No Hit
CATAGATGAAAGACAAGCAGGGAAGCACACTGACGACATGGTATATTTTC6900.5410067429825938No Hit
CATAGACACATGTAGGATGGGGTGGTATATTTTCTAAAGCCTGGGATCTA6660.5221891171397209No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA6580.5159165751920965No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTCTGGAGGATGATCAAT6320.49553081386231773No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCTGGGCATTGCTC5940.46573623961110244No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACTGCCATCACAGTTCATTGT5890.4618159008938372No Hit
CATAGACTTCAGCCCTCACAAGCCTTGCTACCGTAAGGTCAAGGTGGGAG5730.44927081699858873No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTATGCCAGCAAGGGAACAAAAC5690.44613454602477653No Hit
CATAGAGCTATCTGGCAAAAACCCATCACACTGCCATCACAGTTCATTGT5680.44535047828132346No Hit
CATAGAGCTATCTGGCAAAAACCCATCCAGTAGCAAGATAGGACAGAATT5560.4359416653598871No Hit
CATAGAGCATTACCCTCAAACTATCCCTACCGTATGGGCATTGCTCTTGA5440.4265328524384507No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT5370.4210443782342794No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG5290.4147718362866552No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTACCGTAAGTTGCAATATAGATGA5220.4092833620824839No Hit
CATAGAGGTGTCCTTTCCCCACTTTAACACTGATGAGGGTATAAGGTCTA5150.40379488787831264No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG5060.39673827818723534No Hit
CATAGATGAAAGACAAGCAGGGAAGCACACTGATGAGGGTATAAGGTCTA4620.36223929747530187No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACATGTGGGTCTGTTCGGCCA4490.3520464168104124No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4400.3449898071193351No Hit
CATAGAGGGTGCTCCTGTACTGGCTGTGCTGGGTAGTGGTAGTCTATGAG4370.342637603888976No Hit
CATAGATCCACAAAGACCAAGAGTGTCACACTGGAGACAGCCGCTCACCT4250.3332287909675396No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGCTGTCATGATTATCACCTTCTA4190.3285243845068214No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGAGGATGATCAATGCTGCTTCTA4090.32068370707229105No Hit
CATAGAGCTATCTGGCAAAAACCCATCACACTGACGACATGGTTCCATGT3990.31284302963776073No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACAGTTGCAATATAGATGAAA3890.30500235220323035No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT3860.30265014897287124No Hit
CATAGATCCACAAAGACCAAGAGTGTCTACACTGGAGACAGCCGCTCACC3840.3010820134859652No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACATGGAGGATGATCAATGC3760.2948094715383409No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGACGACATGGAGGAT3670.2877528618472636No Hit
CATAGAGCAGACAAACTTGCAAAAGACTACACTGATGAGGGTATAAGGTC3630.2846165908734515No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT3520.2759918456954681No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACATGTAGGTCAAGGTGGGAG3450.2705033714912969No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAACACTGACGACATGGTTATGT3260.2556060843656892No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG3210.251685745648424No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTAGCTGTGCTGGGTAG3180.2493335424180649No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT3130.24541320370079972No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACCGTACCTTACCTCAAATG3120.2446291359573467No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCATCACA2940.2305159165751921No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCAAGTCTTGGAGGATGATCAAT2910.228163713344833No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT2810.22032303591030264No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGCTGTGCTGGGTAGTGGTAGTC2760.21640269719303745No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT2660.20856201975850713No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTGAGGTCAAGGTGGG2610.20464168104124195No Hit
CATAGAGGGTTGGAGATGGGGAAAGGACACCTAGTTGCAATATAGATGAA2560.2007213423239768No Hit
CATAGATCCACAAAGACCAAGAGTGTCGTCAGTGTTGATGAGGGTATAAG2530.19836913909361767No Hit
CATAGAGCAGACAAACTTGCAAAAGACTACACTGACGACATGGTTATGTA2510.19680100360671163No Hit
CATAGAGGTGTCCTTTCCCCACTTTAGTGTGCACTTCTCTCTCCTGCCAC2440.19131252940254037No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTACGGTCTGTTCGG2410.18896032617218128No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG2370.18582405519836914No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT2340.18347185196801002No Hit
CATAGAGCAGACAAACTTGCAAAAGACTGACTTGGTCTCTGACTGTGTTA2040.159949819664419No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGGAGATTTGGACCTGCG1960.15367727771679474No Hit
CATAGACACATGTAGGATGGGGTGGCTCCTGTGCTGGGTAGTGGTAGTCT1950.15289320997334171No Hit
CATAGACACATGTAGGATGGGGTGGCTTACCCTTCACCTTCTGCCATGAT1920.1505410067429826No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTGCAATATAGATGA1910.14975693899952958No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGACTGTGTTAATTTAAAAGAACA1860.1458366002822644No Hit
CATAGAGGGTTGGAGATGGGGAAAGGTCAAGGTGGGAGGATGGTCTATGA1830.14348439705190527No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACCGTATGGAGGATGATCAA1820.14270032930845225No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCTTGGTCTCTGACTGTGTTAATTT1790.14034812607809313No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1760.13799592284773404No Hit
CATAGATCCACAAAGACCAAGAGTGTCGTCAGTGGAGGATGATCAATGCT1720.1348596518739219No Hit
CATAGAGCCACCATGTACTTCTATATAGCTTACACTGACGACATGGTTAT1530.11996236474831426No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTAACCACCTATCTACCCC1500.11761016151795516No Hit
CATAGAGGGTTGGAGATGGGGAAAGGACACCTCCCAGTAGCAAGATAGGA1480.11604202603104907No Hit
CATAGAGCTATCTGGCAAAAACCCATCACACTAACCACCTATCTACCCCC1450.11368982280068997No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTTATGTA1450.11368982280068997No Hit
CATAGAGGGTTGGAGATGGGGAAAGGACAGTTCCATGTGTGTGCGATGTT1430.11212168731378391No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT1380.10820134859651873No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTACGGTAGCTGTGC1370.1074172808530657No Hit
CATAGATCCACAAAGACCAAGAGTGTCGTCAGTGTGGTATATTTTCTAAA1340.10506507762270662No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1340.10506507762270662No Hit
CATAGACTTCAGCCCTCACAAGCCTTACACTGACGACATGGTTATGTAGA1310.10271287439234748No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGCTG1290.10114473890544143No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1290.10114473890544143No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)