FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804232

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804232
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences514858
Sequences flagged as poor quality0
Sequence length150
%GC43

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG9349718.15976443990382No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG328546.381176945876339No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG222874.328766378302367No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA197223.8305707593161613No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC182833.5510762190739973No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG179533.4869808762804504No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC150512.923330316320228No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG97071.8853742196877588No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA79431.5427554782095259No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC68791.3360965547782107No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT55971.0870958594408555No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG54771.0637884620613838No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT54571.059903895831472No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA42000.8157589082815067No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA41470.80546480777224No Hit
CATAGACCCTTCTCCATGCCACATCAAGGGATTATCAGTAGTGCTCACAT41080.7978899036239119No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA40640.7893438579181057No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG38620.750109738995995No Hit
CATAGAGGGGCATGCTGGATAAATCTATGAGCATGTTGAGATGAATAATT38110.7402040951097196No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA36280.7046603141060254No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA33950.6594051175275513No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA32190.6252209347043262No Hit
CATAGAGGGGCATGCTGGATAAATCTATGAGACCAAGTCTCATTCACCAA31880.6191998570479628No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT31570.6131787793915993No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGCATGTTGAGATGAATAATTG31540.6125960944571124No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT31470.6112364962766433No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGGAGGGAAGGAAGGGC31250.6069634734237401No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA28340.5504430347785215No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC27200.5283010072680234No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT26950.5234452994806336No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA26350.5117916007908977No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC26140.5077128062494902No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG25480.49489373769078077No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA24770.4811035275745934No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTCTCTGCTACCGTAAGGGATTA23050.4476962579973507No Hit
CATAGAGGGGCATGCTGGATAAATCTATGAGACCAAGTCTCTGCTACCGT22740.44167518034098724No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC20310.39447770064755716No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGTGTGGAGGGAAGGAAGGGCAAAC19450.37777406585893586No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT18600.3612646593818101No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA18280.35504935341395105No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA18030.3501936456265611No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG17150.3331015542149486No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC17130.3327130975919574No Hit
CATAGATGTGCCTCTCCAACATTCATGTGAAGAGGAGGGAAGGAAGGGCA16630.32300168201717755No Hit
CATAGATCATGCAAAGAACACAGGCCCCACCCTTATGATCGTATCTATGA15520.30144233944116633No Hit
CATAGACACCTGGATCCTGTGTTGTCTTAGGTAGAGGAGTTTCAAACATC15380.29872314308022796No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC15260.2963924033422808No Hit
CATAGACCCTTCTCCATGCCACATCATTTCCCCTCTCTCTGAATAACTCT15100.2932847503583512No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGCATGTTGAGATGAATAATT14270.2771638005042167No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT13600.2641505036340117No Hit
CATAGATCATGCAAAGAACACAGGCCCACACTCATGCAAAGCTGGTCTAT13590.26395627532251614No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC13420.26065439402709095No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA13280.2579351976661526No Hit
CATAGATCACCCAGGTAATCACTAGGTAGAGGAGGGAAGGAAGGGCAAAC13270.257740969354657No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGGGGCAG13240.25715828442017025No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCAAGAATGAGGAGAGTACTACTTTC13110.2546333163707275No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGAGGGAAGGAAGGGCAA12750.24764109715688598No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTTCTTATAGCCAGTGTCTCCCCTC12560.24395075923846965No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTAGGAGGGAAGGAAGGGC12410.2410373345660357No Hit
CATAGAGGTCGCAGCTACCCAGAAAGACACTGACGACATGGAGGGAAGGA11840.2299663208107867No Hit
CATAGATGTGGCTATGCAGACTGAGTGCAGCTATATTGGAGGAAAAGTCT11540.22413947146591875No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCCGTAGGAGGGAAGGAAGG11320.21986644861301563No Hit
CATAGACCATTTGCCGCGTTCTGAAGGAAAGCAATCACCGCCAGTCTATG11200.21753570887506846No Hit
CATAGAAGATGGTCTGCTACACTGGTTCTGGAGACAGCCGCTCACCTCTA10720.20821274992327984No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA10350.20102630239794272No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAGTTTTTCCAAATATAAGAT10270.19947247590597797No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTGCC10180.1977244211025176No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT10160.19733596447952642No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA9970.19364562656111006No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC9810.1905379735771805No Hit
CATAGAAGATGGTCTGCTACACTGGTACGGTGTCAGAGATAGCACAGTGG9060.17597085021501074No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGCAATCACCGCCA9000.17480548034603716No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCATAGAGTCTCGCTAATAGTT8890.1726689689195856No Hit
CATAGAGCTTCTGATCACTTTCGCCCACACTCATGCAAAGCTGGTCTATG8750.16994977255864724No Hit
CATAGACCCTTCTCCATGCCACATCAGGAAAGCAATCACCGCCAGTCTAT8750.16994977255864724No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA8210.159461443737885No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAGCTCTAAC8110.15751916062292903No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGGGTCCTTTTCACATCATCTATG7890.1532461377700259No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGGAAGGAAGGGCAAACT7840.15227499621254792No Hit
CATAGACCATTTGCCGCGTTCTGAAGGCAGATCATGAGGTCAGGTCTATG7680.14916734322861838No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT7610.1478077450481492No Hit
CATAGAGCTTCTGATCACTTTCGCCCATGGGTCCTTTTCACATCATCTAT7370.14314626557225488No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTCAGAGGCAGATCATGAGGTCA7370.14314626557225488No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGGATTATCAGTAGTGCT7280.1413982107687945No Hit
CATAGATTCTCAGAGGTTCAATTTGGTTTTTACGGGGGCAGATTAACAGG7190.13965015596533414No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCTACGGGGGCAGATTAACAGG7160.13906747103084735No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTCACTGACGACATGGTTCTACA6910.13421176324345743No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACCACTTGAACATTGCCTT6830.13265793675149265No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGACGGAGTGAGGGCAGT6740.13090988194803227No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG6490.12605417416064235No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA6440.12508303260316436No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGCCCCACCCTTATGAT6290.12216960793073042No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCCTGC6210.12061578143876565No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGACAGCCGCTCACCTCTA6110.11867349832380966No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGGAGACAGCCGCTCACCTCTA6060.11770235676633169No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC5970.11595430196287132No Hit
CATAGAAGATCCCATAGCAGCTTTGCACACTGACGGAGTGAGGGCAGTAA5810.11284664897894177No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGCG5430.10546597314210909No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATAA5320.10332946171565752No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)