FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences514858
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA9201217.871335397332857No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG332996.467608544491879No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG245084.760147458134088No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT197403.834066868923082No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC178353.4640619355239695No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG176423.426575871405319No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG151272.9380916679938935No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG95231.8496362103725688No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA81361.5802415423281762No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT79321.540618966783074No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG69641.3526059612553365No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT56061.088843914244316No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT55401.0760248456856065No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA41900.8138166251665508No Hit
CATAGATGTGAGCACTACTGATAATCCCTTGATGTGGCATGGAGAAGGGT41600.8079897758216829No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG39120.7598211545707748No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA37950.73709644212579No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCATAGATTTATCCAGCAT37690.7320465060269045No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC36960.7178678392877259No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT34470.6695049897253222No Hit
CATAGAGGCTGGGTGACTTGGTGAATGAGACTTGGTCTCATAGATTTATC32360.6285228159997513No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC31470.6112364962766433No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC31460.6110422679651476No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCTTGGCCTCAGTTTCCCC31150.6050211903087841No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA31090.6038558204398106No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT30630.5949213181110131No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT28710.5576294823038586No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA26600.5166473085782876No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC26540.515481938709314No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA26350.5117916007908977No Hit
CATAGACCAAACACAGAAGACATGGCAAAGCTGCTATGGGATCTTCTATG25350.49236876964133797No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA24660.4789670161481418No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGGCCTCAGTTTCCCCTCCTTCT23870.46362297953998965No Hit
CATAGATGTGAGCACTACTGATAATCCCTTACGGTAGCAGAGACCTCTCT22700.44089826709500485No Hit
CATAGATTTATCCAGCATGCCCCTCTATGTGTAGAACCATGTCGTCAGTG22200.43118685152022496No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC20320.39467192895905284No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACACTGGCCTCAGTTTCCCCTCCT19840.38534897000726415No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA18690.3630127141852705No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT18190.3533012986104907No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC17710.343978339658702No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG17320.3364034355103737No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA17100.3321304126574706No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTCTTCACATGAATGTTGGAGAGGC17010.3303823578540102No Hit
CATAGATACGATCATAAGGGTGGGGCCTGTGTTCTTTGCATGATCTATGT16840.3270804765585851No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA15860.3080461020320166No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACAACACAGGATCCAGGTGTC15540.3018307960641575No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATGTGGCATGGAGAAGGGTCT15410.2993058280147147No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTTGGCCTCAGTTTCCC14090.2736676908972959No Hit
CATAGACCAGCTTTGCATGAGTGTGGGCCTGTGTTCTTTGCATGATCTAT13970.2713369511593488No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTCTACCTAGTGATTACCTGGGTGA13620.2645389602570029No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTGACTTGGCCTCAGTTTCCCC13610.26434473194550734No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG13300.2583236542891438No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGAGAGAAAACTACCCCAGG13100.2544390880592319No Hit
CATAGAGGGGAGACACTGGCTATAAGAAAGACACTGGGGGCACAAAGTTC12670.2460872706649212No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTAGAGACTTGGCCTCAGTTTCCCC12490.24259116105800047No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCATGTCGTCAGTGTCTTTCTGGGTA11950.23210283223723824No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTACGGAGACTTGGCCTCAGTTTCC11570.22472215640040555No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCAGTCTGCATAGCCACATCT11520.22375101484292756No Hit
CATAGACTGGCGGTGATTGCTTTCCTTCAGAACGCGGCAAATGGTCTATG11390.22122604679348482No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT11190.21734148056357286No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGATGTTTTAAAATGAGCACCTAA10800.2097665764152446No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAACCAGTGTAGCAGACCATCTTCTA10620.20627046680832384No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTTGAGGTAAAACTAT10390.20180321564392512No Hit
CATAGACCAAACACAGAAGACATGGCAGACTTGGTCTCATAGAGGGGAGA10320.20044361746345596No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT10090.19597636629905718No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG9920.19267448500363207No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTGGCCTCAGTTTCCCCTCCTTC9550.18548803747829498No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA9390.18238038449436544No Hit
CATAGATCCACTGTGCTATCTCTGACACCGTACCAGTGTAGCAGACCATC9220.17907850319894028No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA9050.17577662190351515No Hit
CATAGACTGGCGGTGATTGCTTTCCTGATGTGGCATGGAGAAGGGTCTAT8820.17130937073911642No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAAGCTGCTATGGGATC8800.1709209141161252No Hit
CATAGACCAGCTTTGCATGAGTGTGGGCGAAAGTGATCAGAAGCTCTATG8520.16548252139424852No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG8320.1615979551643366No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA8210.159461443737885No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG8150.15829607386891142No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG7840.15227499621254792No Hit
CATAGACCTGACCTCATGATCTGCCTTCAGAACGCGGCAAATGGTCTATG7720.14994425647460077No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAAGCTGCTATGGGATCTT7630.1481962016711404No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTTTTAAAATGAGCACCT7490.14547700531020202No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAAAAACCAAATTGAACCTCTGA7400.14372895050674167No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT7350.14275780894926368No Hit
CATAGATGATGTGAAAAGGACCCATGGGCGAAAGTGATCAGAAGCTCTAT7340.14256358063776808No Hit
CATAGACCTGACCTCATGATCTGCCTCTGACCTCTCTCATAGCAGCATTT7330.14236935232627249No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAGGGAAGTAGGGAATGATTACA7130.13848478609636056No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG7050.13693095960439577No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG6960.1351829048009354No Hit
CATAGATACGATCATAAGGGTGGGGCCAGAGACTTGGCCTCAGTTTCCCC6580.12780222896410273No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC6580.12780222896410273No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA6460.12547148922615556No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG6430.12488880429166876No Hit
CATAGAGGTGAGCGGCTGTCTCCACTTGGCCTCAGTTTCCCCTCCTTCTA6100.11847927001231408No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG5970.11595430196287132No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA5970.11595430196287132No Hit
CATAGACTTACTGCCCTCACTCCGTCAGTGTGCAAAGCTGCTATGGGATC5940.11537161702838454No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA5180.10061026535471916No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)