FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804235

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804235
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113750
Sequences flagged as poor quality0
Sequence length150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2790224.52923076923077No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT53914.73934065934066No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT35253.098901098901099No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA33962.9854945054945055No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA32842.887032967032967No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG27472.414945054945055No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA25012.1986813186813188No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG17551.542857142857143No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT16841.4804395604395604No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT14861.3063736263736263No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA13751.208791208791209No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA13721.2061538461538461No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG12791.1243956043956045No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA12221.0742857142857143No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT11551.0153846153846153No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9460.8316483516483517No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT8960.7876923076923077No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG8560.7525274725274725No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA8440.741978021978022No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA8290.7287912087912087No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG7230.6356043956043956No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7080.6224175824175824No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC6960.6118681318681318No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA6890.6057142857142858No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA6870.603956043956044No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT6760.5942857142857143No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT6350.5582417582417583No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC5720.5028571428571428No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC5680.49934065934065935No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC5680.49934065934065935No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTGTTTACTCGGAGATTTGACTG5650.4967032967032967No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT5410.47560439560439566No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATAGGAGGAGCTGACT5260.4624175824175824No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGGCAACATATCAG5030.4421978021978022No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGGAATCTTTGGGAGG4930.4334065934065934No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACATAGACTCTGTTTACTCGGAGA4850.42637362637362636No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA4780.42021978021978024No Hit
CATAGATCACCAGATGCCAGTTGTGCCATAGGAGGAGCTGACTTACTGTT4740.4167032967032967No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC4690.41230769230769226No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA4480.39384615384615385No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT4460.39208791208791205No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT4420.38857142857142857No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA4310.3789010989010989No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4280.37626373626373627No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGAGGAGAATGATATTGT4250.37362637362637363No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATTCTGTTTACTCGGAGATTT4050.35604395604395606No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT3690.3243956043956044No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTTGGGAAAGGTATGT3570.31384615384615383No Hit
CATAGACCACACACACAACTGAGAGTACGGCAACATATCAGAAGCATCTA3510.3085714285714286No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3430.30153846153846153No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT3210.2821978021978022No Hit
CATAGACACACTGACAATTTGCACCTGTACGGCAACATATCAGAAGCATC3190.2804395604395604No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG3150.2769230769230769No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAAGCCCCAGG3150.2769230769230769No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT3100.27252747252747256No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT3070.26989010989010986No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAACCATGTCGTCAG2940.25846153846153846No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT2850.25054945054945055No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2840.24967032967032968No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAGTTTCTAGCTT2830.24879120879120878No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG2800.24615384615384617No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT2730.24No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2620.23032967032967033No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTAGCACTATTCTCTGGCCC2620.23032967032967033No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA2510.22065934065934067No Hit
CATAGAACCAACCTCTCTATCTCCGTACAACCAAAATGTCAGGGGATCCT2510.22065934065934067No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA2490.21890109890109888No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA2470.21714285714285717No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTAGAAGTGTATTAATT2470.21714285714285717No Hit
CATAGATTCAACCAGCCATCCCCAATTACGGTCACTGACAGGTCTTAAAG2430.21362637362637363No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2380.20923076923076925No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG2360.20747252747252745No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCTAGCCAAATTCCTTACCGATCT2340.2057142857142857No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCTCATAGAAGTGTATTAATTAT2330.20483516483516484No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA2320.20395604395604394No Hit
CATAGATATTCTGCCCCCTCCTCTCCAACCAAAATGTCAGGGGATCCTCT2310.2030769230769231No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG2300.2021978021978022No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTAGAAGTGTATTAATTAT2120.18637362637362637No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA2070.181978021978022No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT2020.17758241758241758No Hit
CATAGATATTCTGCCCCCTCCTCTCCACGATAGCGAGAAGAGTGGAGGCT1990.17494505494505494No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATTCTCTCAGGGCTGTTCTCTAT1830.16087912087912087No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGCAATATGGGCTGGGTGA1800.15824175824175826No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA1780.1564835164835165No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1720.1512087912087912No Hit
CATAGACCATCCCTTCTACAAGAGGCATAGGGCACTGAGACCACATCTAT1580.1389010989010989No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1560.13714285714285715No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG1550.13626373626373628No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA1550.13626373626373628No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA1520.1336263736263736No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1500.13186813186813187No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1470.12923076923076923No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1440.1265934065934066No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCACTGAGCTGAGGGTCACTTCTAT1430.1257142857142857No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1410.12395604395604395No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAATGGCTTCCA1380.12131868131868133No Hit
CATAGAGCCCCCAGAGAAGAATGACCGAGGAGAATGATATTGTTGCAGAT1360.11956043956043956No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT1350.11868131868131868No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1330.11692307692307692No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1310.11516483516483517No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT1260.11076923076923079No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGGATAATAGAAGGTC1250.10989010989010989No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1240.109010989010989No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGCATT1230.10813186813186813No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1230.10813186813186813No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCAAAGTGCTGGGATTACAGGC1220.10725274725274725No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTTA1200.10549450549450548No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1160.10197802197802197No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)