FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804236

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804236
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54437
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2279941.88144093171923No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG16062.950199312967283No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA13512.481767915204732No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA11652.1400885427191065No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG10871.9968036445799733No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA9551.7543215092675937No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC9381.7230927494167572No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA6451.1848558884582177No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA6181.1352572698715946No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC5851.0746367360434999No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG5471.0048312728475117No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC4980.9148189650421588No Hit
CATAGAAGATCCCATAGCAGCTTTGCCAAATATAAGATCCCATAGCAGTT2980.5474217903264323No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG2900.5327259033378033No Hit
CATAGAGCTTCTGATCACTTTCGCCCGGTTCTACACATAGAGTCTCGCTA2840.5217039880963315No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC2770.5088450869812811No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC2700.49598618586623067No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT2560.47026838363612977No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG2490.4574094825210794No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA2240.41148483568161365No Hit
CATAGACCCTTCTCCATGCCACATCATCCCATGGGTCCTTTTCACATCAT2070.38025607583077686No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC2010.3692341605893051No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG1790.32882047137057513No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1760.32330951374983924No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC1740.31963554200268196No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA1550.28473281040468795No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA1500.2755478810367948No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGCCATGGGTCCTTTTC1480.27187390928963756No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT1440.264525965795323No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGCATGTTGAGATGAATAAT1410.2590150081745871No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT1350.24799309293311533No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1340.2461561070595367No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGAAAGCAATCACCGCCA1330.24431912118595805No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT1300.23880816356522216No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA1200.22043830482943588No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG1200.22043830482943588No Hit
CATAGATCATGGGACTTCAGCATGGCCCCAAACACTGCCTTCCTCTCTGC1170.2149273472087No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA1160.21309036133512135No Hit
CATAGAGCTTCTGATCACTTTCGCCCATGGTTCTACACATAGAGTCTCGC1160.21309036133512135No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1130.20757940371438546No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG1120.20574241784080682No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCAAGAATGAGGAGAGTACTACTTTC1080.1983944743464923No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT1070.19655748847291366No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT1040.19104653085217774No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC1030.1892095449785991No Hit
CATAGACCCTTCTCCATGCCACATCAGTTTTTCCAAATATAAGATCCCAT990.18186160148428457No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACATAGATTAAGTGCAGCTAT980.18002461561070596No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG980.18002461561070596No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA960.17635064386354868No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACAGTCCTGGCATA950.17451365798997004No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAAGAGTGCAGCTATATTGGAG910.1671657144956555No Hit
CATAGAAGATCCCATAGCAGCTTTGCCTCGCTAATAGTTTTTCCAAATAT900.1653287286220769No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA890.16349174274849826No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA870.15981777100134098No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG860.15798078512776237No Hit
CATAGAGGGGCATGCTGGATAAATCTATGAGACCAAGTCTCTGGAGGGAA850.15614379925418373No Hit
CATAGACCCTTCTCCATGCCACATCAGTGTAGTTTTTCCAAATATAAGAT850.15614379925418373No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCAGGAGCAGAGATGGATGGGGA830.15246982750702645No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG820.15063284163344784No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGGAAAGCAATCACCGCCAGT820.15063284163344784No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAATGGCATTAAATGACTTGCCCAA820.15063284163344784No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG820.15063284163344784No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT810.1487958557598692No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG790.14512188401271192No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGAGCATGTTGAGATGAATAA790.14512188401271192No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGGGATTATCAGTAGTGC780.1432848981391333No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTATGGCTACG770.14144791226555467No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC770.14144791226555467No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA760.13961092639197603No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG730.13409996877124014No Hit
CATAGATGTGCCTCTCCAACATTCATACACTGACGCCATGGGTCCTTTTC700.12858901115050425No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG690.1267520252769256No Hit
CATAGATCACCTACACAGACAGCTTTCCGTAAAACCACTTGAACATTGCC660.12124106765618971No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG660.12124106765618971No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACGGGGGCAGATTAACAGGTCAT660.12124106765618971No Hit
CATAGAAGATGGTCTGCTACACTGGTGGTTCCACACTCATGCAAAGCTGG650.11940408178261108No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCACACTGACGACATGGTTCTACACA650.11940408178261108No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG640.11756709590903244No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC640.11756709590903244No Hit
CATAGATCACCCAGGTAATCACTAGGTGAGCCATGGGTCCTTTTCACATC640.11756709590903244No Hit
CATAGAAGATCCCATAGCAGCTTTGCCTAATAGTTTTTCCAAATATAAGA640.11756709590903244No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGAGCAGAGTTGGGTGTGTC620.11389312416187518No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCAGTGTCCATGGGTCCTTTTC580.10654518066756068No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG570.10470819479398205No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGTGGAGGTTGCAGTGAGCCAAGA560.10287120892040341No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGGGTCCTTTTCACATCATCTA550.10103422304682477No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)