FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences270549
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC148415.485512790658993No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA120804.464995250398264No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA113834.2073709383512785No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC97783.6141327449001843No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA83583.089274031691117No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT74472.752551293850652No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA73382.712262843329674No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA69962.585853209584955No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA68772.541868570942787No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG50991.8846863229950952No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT41031.5165459861245099No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG41011.5158067485002715No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT39651.4655385900520794No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC37371.3812655008889332No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA35371.307341738465121No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA33911.2533773918957378No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA25770.9525076788308218No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT25070.9266343619824875No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG24990.9236774114855348No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG24040.8885636243342241No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT22610.8357081342011984No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA22430.8290549955830552No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC22080.816118337158888No Hit
CATAGAATCCCTGCCCTTGACCTTGGCATAGATCTACTCCAGTCTCGGCA21840.8072474856680306No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA21780.8050297727953163No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT21030.7773083618863865No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG20650.7632628470258622No Hit
CATAGATTTGGCACTCACATACACGCACACTGATCTAGCTTCGGAATGTT19920.7362806737411708No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT19410.7174301143230987No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC18850.696731460844431No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA18730.6922960350990024No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG18690.6908175598505262No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT17570.6494202528931913No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC15440.5706914459118312No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA15330.5666256389785215No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT14880.5499927924331637No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG14670.5422307973786634No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT14460.534468802324163No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC14410.5326207082635678No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG14390.5318814706393297No Hit
CATAGACCATGTAATACCATCGTGAGCAGATAGCCTTCTCTGATACCATC13120.4849398815002088No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA13080.48346140625173256No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT12970.4793955993184229No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG12830.47422093594875603No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAGTCACTCAAATATAGAC12280.45389190128220763No Hit
CATAGATTGCCTCATTGTGCCAGACAAGCACATTATTATTGGTTGGTTCT12130.44834761910042176No Hit
CATAGATGTCCCCATTCATCCTGCAACACACATAGATGTCCCCCTTCATT12110.4476083814761836No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA11740.43393248542777835No Hit
CATAGAATTCCCCAATGTCCTGTGCAGGGATAGTCACTCAAATATAGACC11640.43023629730658774No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT11600.4287578220581114No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC11350.4195173517551349No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCCCTTTACCTACCTTCTCAGCTC11190.41360345076122995No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA10990.4062110745188487No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA10940.4043629804582534No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT10930.40399336164613436No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA10610.39216555965832434No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGAACAAGGGCATGGTCAAGTG10510.38846937153713373No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAATGGGCACACTTAAC10490.3877301339128956No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT10440.3858820398523003No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAGGATGACTTATGGAA10200.3770111883614429No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCGGCCGCACTGAAATTGTCTA9800.36222643587668035No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA9790.3618568170645613No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA9570.353725203197942No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA9120.3370923566525842No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGGAATTAGAGCCAGTTCT9010.33302654971927453No Hit
CATAGACCATGTAATACCATCGTGAGCAGAGCTCTCTTCCGCCTTTATCC8850.32711264872536955No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT8760.32378607941629794No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGATGACTTATGGAATCTG8680.32082912891934545No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA7990.29532543088313024No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTACCGTACACCCGTAATCCC7980.2949558120710112No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG7970.2945861932588921No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT7810.2886722922649871No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT7340.27130020809539124No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGCCTTCTCTGATACCATCCC7110.2627989754166528No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA7020.25947240610758127No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCTGGCAAAAGGGTAAGAG6980.257993930859105No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG6660.24616612887129502No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTACAATGGGCACACTTAA6500.24025222787739003No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC6440.2380345150046757No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA6150.22731556945322287No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCAAACAGAATGGGACCCATCTAT6140.22694595064110382No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA6100.2254674753926276No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC6030.22288014370779413No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT6010.22214090608355602No Hit
CATAGATCATGGGACTTCAGCATGGTGAAAAGTAGGGGACAGTTCTATGA5880.21733586152600823No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5860.21659662390177012No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGGTTTTCCGGCTTGAGGTTCT5700.21068272290786513No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGAAAAGTAGGGGACAGTTCT5570.20587767835031734No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC5540.20476882191396012No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG5440.20107263379276955No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTTGTCCTTGCACACCATG5350.19774606448369797No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA5250.19404987636250734No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT4980.1840701684352927No Hit
CATAGATGGCATGTCACTTCCTCAGACACTGACGACAAGGTTTTCCGGCT4830.17852588625350677No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATTGTCCTTGCACACCATGG4750.17556893575655427No Hit
CATAGACAGTCCTGCCGTGTACATGTACTCTTACCCTTTTGCCAAGATTG4750.17556893575655427No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA4700.17372084169595894No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGTACAGCCTACATCCCT4680.17298160407172083No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC4620.17076389119900648No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4580.1692854159505302No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTACAAGCACATTATTATT4440.16411075258086336No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT4430.1637411337687443No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG4410.1630018961445062No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG4320.15967532683543462No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4270.1578272327748393No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT4250.15708799515060118No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC4210.15560951990212493No Hit
CATAGACCATGTAATACCATCGTGAGCAGCCTACATCCCTCTCCCCAAAA4180.15450066346576777No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT4030.1489563812839818No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA3900.14415133672643402No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGAACAA3860.1426728614779578No Hit
CATAGAATTGCCTACTTTGGGACCCATCCCAAGTATATGACACATTACAC3850.14230324266583874No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACACTGACGACAAGGTTTTCC3850.14230324266583874No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG3840.14193362385371966No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACAGGGCAAGTGTATGGTCAGTT3830.1415640050416006No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA3770.13934629216888622No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCAGGGCAAGTGTATGGTCAGT3650.13491086642345748No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT3630.13417162879921937No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCATAGAACTGAGGCGTGGTATGAG3490.1289969654295525No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC3490.1289969654295525No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC3010.11125526244783754No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC2980.11014640601148037No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAAACCAAACAATAGCC2980.11014640601148037No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT2890.1068198367024088No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACTTAGGAGTTCTGGCCC2880.10645021789028974No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2790.1031236485812182No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2720.10053631689638477No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)