FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804241

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804241
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences270549
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG151395.595659196670474No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT121514.491238186058718No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT114854.245072057187422No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG97603.6074796062820416No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT84213.1125600168546175No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT74172.74146272948708No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT72652.6852806700449827No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT68712.5396508580700723No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT67742.503797833294523No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG51511.9039065012252863No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT49111.8151979863167116No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG40721.5050878029488188No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT39781.4703436346096272No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG37421.3831135949495286No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT35271.3036455503439304No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT33381.2337875948534278No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG25390.9384621639702974No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG24920.9210900798007016No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC24590.9088926590007725No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG23930.8844978174009144No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT22710.8394043223223889No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT22210.8209233817164359No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC22130.8179664312194834No Hit
CATAGACTTGTTGCCGAGACTGGAGTAGATCTATGCCAAGGTCAAGGGCA21580.797637396552935No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT20870.7713944608924815No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC20350.7521742826622904No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTGCGTGTATGTGAGTGC19830.7329541044320992No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT19310.713733926201908No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC18720.6919264162868833No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT18590.6871213717293355No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA18190.6723366192445731No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT17520.6475721588325959No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG16390.605805233063142No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC15450.5710610647239502No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT15110.558494025111902No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA14800.5470358419362111No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT14650.5414915597544253No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC14560.5381649904453537No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG14410.5326207082635678No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTGCTCACGATGGTATTACAT13170.48678797556080416No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT13010.4808740745668992No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT12860.4753297923851132No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG12690.4690462725790892No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT12500.462023515148827No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTACACTGCTCACGATGGTAT11990.4431729557307549No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT11830.43725905473684984No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGACATCTATGTGTGTTGCAGGATG11670.4313451537429449No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTATCCCTGCACAGGACATTG11640.43023629730658774No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT11530.42617049037327803No Hit
CATAGAACTGACCATACACTTGCCCTTCTAGTCTAGGATGAGATAATTGC11290.41729963888242055No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGACACTTGAAAGCTCCCTGGATC11130.4113857378885156No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA10810.3995579359007056No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT10760.39770984184011027No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT10690.3951225101552769No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTAGGTGGCTTCTGGTGCA10510.38846937153713373No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT10390.384033945791705No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGCATTCTTTCTCCA10340.3821858517311097No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG10280.3799681388583953No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTCATAGACACTTGAAAGCTCCCT10220.377750425985681No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT9980.3688795744948235No Hit
CATAGACAATTTCAGTGCGGCCGATGGATCTCAGAGTTAGCTTGCCTCTA9640.35631253488277537No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC9380.3467024457676798No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC8960.3311784556586792No Hit
CATAGACTCAGAACTGGCTCTAATTCCTTACGGTTGCAGGATGAATGGGG8870.32785188634960766No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTCTGCTCACGATGGTATTACATG8700.3215683665435836No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT8680.32082912891934545No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTTGCAGGATGAATGGG8610.31824179723451207No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC8210.3034570447497496No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7990.29532543088313024No Hit
CATAGAAAAGGGAGGGATTACGGGTGTACGGTAGCAGACACTTGAAAGCT7880.2912596239498205No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC7850.29015076751346336No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT7250.2679736387863197No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT7180.2653863071014862No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTACGGTAGGTGGCTTCTGGTGCA7130.2635382130408909No Hit
CATAGAACTCTTACCCTTTTGCCAGGTACGGTTGCAGGATGAATGGGGAC6940.2565154556106288No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC6540.24173070312586628No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG6540.24173070312586628No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACACTGAACGAAATTTAGGTGAG6410.2369256585683185No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA6110.22583709420474665No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTTAGGCTACTTGGGGGTCTCTAT6060.22398900014415132No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC5990.2214016684593179No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT5950.21992319321084167No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT5950.21992319321084167No Hit
CATAGAACTGTCCCCTACTTTTCACCATGCTGAAGTCCCATGATCTATGT5910.2184447179623654No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA5730.21179157934422232No Hit
CATAGAACCTCAAGCCGGAAAACCTTGGATCTCAGAGTTAGCTTGCCTCT5730.21179157934422232No Hit
CATAGAACTGTCCCCTACTTTTCACCAGGAGTTGACAAACGACAGCTTCT5640.20846501003515075No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA5600.2069865347866745No Hit
CATAGATCCATGGTGTGCAAGGACAACACTGAACGAAATTTAGGTGAGCA5320.1966372080473408No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC5290.1955283516109836No Hit
CATAGAACTGACCATACACTTGCCCTTCTGTCTAGGATGAGATAATTGCC5230.19331063873826923No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG4950.1829613119989355No Hit
CATAGATCTACTCCTACAATCTTGGCAAAAGGGTAAGAGTACATGTACAC4750.17556893575655427No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTCTGAGGAAGTGAC4720.17446007932019708No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT4660.17224236644748273No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC4630.17113351001112553No Hit
CATAGATCCATGGTGTGCAAGGACAATGGTGTGCACAGGACATTGGGGAA4620.17076389119900648No Hit
CATAGATGAGGGATGTAGGCTGTACACTACGGTTGCAGGATGAATGGGGA4580.1692854159505302No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACACTGAACGAAATTTAGGT4450.1644803713929824No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT4440.16411075258086336No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG4320.15967532683543462No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC4310.15930570802331556No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4280.15819685158695837No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT4150.15339180702941055No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG4090.1511740941566962No Hit
CATAGAGCAGAATTTTGGGGAGAGGGATGTAGGCTGCTCACGATGGTATT4080.15080447534457714No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4060.15006523772033903No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT4030.1489563812839818No Hit
CATAGACACTTGACCATGCCCTTGTTCAGAGACTTGGTCTCATAGACACT4000.14784752484762465No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG4000.14784752484762465No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT3930.1452601931627912No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGATGGGTCCCAAAGTAGGC3870.14304248029007685No Hit
CATAGAACTGACCATACACTTGCCCTGTAGCAGCTCCTCTTCTCTTCCCT3830.1415640050416006No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTGCCAAGTAAGTCT3820.14119438622948152No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA3800.1404551486052434No Hit
CATAGAACTGACCATACACTTGCCCTGGTAGCAGCTCCTCTTCTCTTCCC3680.13601972285981467No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT3670.13565010404769562No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA3640.13454124761133843No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA3440.1271488713689572No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGGCTAACTTCGCCTGC3420.12640963374471909No Hit
CATAGACTGGCTATTGTTTGGTTTGTACACGGCAGGGCTGCATGGTGACT2920.10792869313876599No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG2920.10792869313876599No Hit
CATAGACAGGGGCCAGAACTCCTAAGTCTCATAGACAGGGGTGTGGTGTT2880.10645021789028974No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT2830.10460212382969443No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT2760.102014792144861No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)